Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC093765.1-201ENST00000603758 881 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 AC019193.2-201ENST00000610012 634 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN3O15551 AL049536.1-201ENST00000625043 744 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CLDN3O15551 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN3O15551 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN3O15551 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN3O15551 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN3O15551 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.02□□□□□ -1.61
CLDN3O15551 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN3O15551 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CLDN3O15551 AL132640.2-201ENST00000559968 1698 ntBASIC5.02□□□□□ -1.61
CLDN3O15551 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN3O15551 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN3O15551 AL355852.1-201ENST00000454081 1771 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.01□□□□□ -1.61
CLDN3O15551 AC110792.3-201ENST00000595906 1614 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN3O15551 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.01□□□□□ -1.61
CLDN3O15551 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.01□□□□□ -1.61
CLDN3O15551 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
CLDN3O15551 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN3O15551 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.01□□□□□ -1.61
CLDN3O15551 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.01□□□□□ -1.61
CLDN3O15551 SDHCP2-201ENST00000398565 501 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN3O15551 UQCRBP1-201ENST00000421129 336 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 MTND2P2-201ENST00000434633 945 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN3O15551 AL935212.3-201ENST00000450729 284 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN3O15551 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN3O15551 RPS4XP12-201ENST00000461747 709 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 RN7SL346P-201ENST00000491561 294 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 AK3P4-201ENST00000504283 583 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 AC117525.1-201ENST00000515228 503 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 snoU109.6-201ENST00000516831 118 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN3O15551 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN3O15551 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.01□□□□□ -1.61
CLDN3O15551 AC079075.1-201ENST00000559543 878 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 AC209154.1-201ENST00000582156 337 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 AC020915.5-201ENST00000596836 964 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 AC005520.3-201ENST00000602874 370 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.01□□□□□ -1.61
CLDN3O15551 MIR6748-201ENST00000610433 71 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 AC100847.1-201ENST00000611316 481 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 AL133243.1-201ENST00000614487 366 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.01□□□□□ -1.61
CLDN3O15551 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.01□□□□□ -1.61
CLDN3O15551 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.01□□□□□ -1.61
CLDN3O15551 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLDN3O15551 AC021242.1-201ENST00000507315 2035 ntBASIC5.01□□□□□ -1.61
CLDN3O15551 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN3O15551 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CLDN3O15551 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLDN3O15551 RNA5-8SP7-201ENST00000363443 155 ntBASIC5□□□□□ -1.61
CLDN3O15551 MT-TP-201ENST00000387461 68 ntBASIC5□□□□□ -1.61
CLDN3O15551 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLDN3O15551 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLDN3O15551 RN7SKP247-201ENST00000411094 308 ntBASIC5□□□□□ -1.61
CLDN3O15551 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN3O15551 AC012519.1-201ENST00000424588 610 ntBASIC5□□□□□ -1.61
CLDN3O15551 CENPIP1-201ENST00000425713 902 ntBASIC5□□□□□ -1.61
CLDN3O15551 RPL23AP1-201ENST00000428990 471 ntBASIC5□□□□□ -1.61
CLDN3O15551 MTCO1P45-201ENST00000431457 267 ntBASIC5□□□□□ -1.61
CLDN3O15551 MAPRE1P3-201ENST00000435438 796 ntBASIC5□□□□□ -1.61
CLDN3O15551 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5□□□□□ -1.61
CLDN3O15551 RPS26P2-201ENST00000440331 348 ntBASIC5□□□□□ -1.61
CLDN3O15551 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5□□□□□ -1.61
CLDN3O15551 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5□□□□□ -1.61
CLDN3O15551 AC096741.1-201ENST00000472250 846 ntBASIC5□□□□□ -1.61
CLDN3O15551 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5□□□□□ -1.61
CLDN3O15551 RN7SL459P-201ENST00000481078 302 ntBASIC5□□□□□ -1.61
CLDN3O15551 HAUS1P1-201ENST00000505275 832 ntBASIC5□□□□□ -1.61
CLDN3O15551 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5□□□□□ -1.61
CLDN3O15551 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
CLDN3O15551 BTG4P1-201ENST00000510421 183 ntBASIC5□□□□□ -1.61
CLDN3O15551 TRAV11-201ENST00000539512 339 ntBASIC5□□□□□ -1.61
CLDN3O15551 AC015912.2-201ENST00000571053 181 ntBASIC5□□□□□ -1.61
CLDN3O15551 BMS1P7-201ENST00000602440 1052 ntBASIC5□□□□□ -1.61
CLDN3O15551 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5□□□□□ -1.61
CLDN3O15551 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5□□□□□ -1.61
CLDN3O15551 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLDN3O15551 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5□□□□□ -1.61
CLDN3O15551 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLDN3O15551 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
CLDN3O15551 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLDN3O15551 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CLDN3O15551 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN3O15551 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLDN3O15551 AL592148.3-201ENST00000608771 2646 ntBASIC4.99□□□□□ -1.61
CLDN3O15551 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CLDN3O15551 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN3O15551 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN3O15551 AC125257.1-201ENST00000560400 2930 ntBASIC4.99□□□□□ -1.61
CLDN3O15551 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms