Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PCDH17O14917 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
PCDH17O14917 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH17O14917 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH17O14917 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDH17O14917 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH17O14917 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH17O14917 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH17O14917 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH17O14917 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDH17O14917 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDH17O14917 AC027228.2-201ENST00000567141 2154 ntBASIC5.21□□□□□ -1.58
PCDH17O14917 PABPC1P6-201ENST00000445594 1829 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PCDH17O14917 AC083899.1-201ENST00000454465 3819 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
PCDH17O14917 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDH17O14917 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH17O14917 GTF2IP5-201ENST00000414608 731 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 RIMKLBP2-201ENST00000424737 654 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AC073069.1-201ENST00000428657 441 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 RPL21P110-201ENST00000433345 446 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 PTMAP6-201ENST00000439110 327 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AC019185.1-201ENST00000442718 389 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDH17O14917 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH17O14917 NAP1L1P3-201ENST00000462291 880 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AC073522.1-201ENST00000483312 377 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 UBA52P7-201ENST00000486088 380 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 AC098799.3-201ENST00000506095 438 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH17O14917 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 RPS27AP18-201ENST00000515536 459 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 RN7SKP99-201ENST00000517028 307 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH17O14917 OR8A2P-201ENST00000528631 952 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH17O14917 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDH17O14917 OR5AM1P-201ENST00000532136 1032 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDH17O14917 AC023050.2-201ENST00000544968 387 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDH17O14917 OR4U1P-201ENST00000554958 912 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AC068714.1-201ENST00000559623 800 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AC090751.1-201ENST00000566966 267 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 DPRXP4-201ENST00000578053 568 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDH17O14917 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH17O14917 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.2□□□□□ -1.58
PCDH17O14917 SUGT1P3-202ENST00000604259 383 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AC099676.1-201ENST00000608886 657 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AC004948.1-201ENST00000609858 672 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AC009237.15-201ENST00000610252 501 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AC010632.3-201ENST00000611377 369 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AC079395.3-201ENST00000615161 484 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AL118522.2-201ENST00000616045 615 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 AC013470.4-201ENST00000619978 986 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 CDRT1-208ENST00000630868 794 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDH17O14917 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDH17O14917 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PCDH17O14917 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH17O14917 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH17O14917 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 AC092079.1-201ENST00000558620 1985 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH17O14917 AC104446.1-201ENST00000613728 1321 ntBASIC5.2□□□□□ -1.58
PCDH17O14917 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDH17O14917 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDH17O14917 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH17O14917 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDH17O14917 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDH17O14917 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.19□□□□□ -1.58
PCDH17O14917 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDH17O14917 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDH17O14917 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH17O14917 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH17O14917 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PCDH17O14917 BTBD10P1-201ENST00000549824 1352 ntBASIC5.19□□□□□ -1.58
PCDH17O14917 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH17O14917 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH17O14917 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDH17O14917 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDH17O14917 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms