Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
SOX1O00570 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.63□□□□□ -1.35
SOX1O00570 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SOX1O00570 AC074141.1-201ENST00000588129 2995 ntBASIC6.63□□□□□ -1.35
SOX1O00570 NAMPTP1-201ENST00000440465 2514 ntBASIC6.62□□□□□ -1.35
SOX1O00570 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SOX1O00570 AC132219.2-201ENST00000624416 2327 ntBASIC6.62□□□□□ -1.35
SOX1O00570 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SOX1O00570 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SOX1O00570 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.62□□□□□ -1.35
SOX1O00570 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
SOX1O00570 AC092111.1-201ENST00000618256 3358 ntBASIC6.62□□□□□ -1.35
SOX1O00570 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SOX1O00570 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC6.62□□□□□ -1.35
SOX1O00570 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SOX1O00570 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SOX1O00570 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
SOX1O00570 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SOX1O00570 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SOX1O00570 Y_RNA.263-201ENST00000364659 114 ntBASIC6.62□□□□□ -1.35
SOX1O00570 Y_RNA.296-201ENST00000364930 108 ntBASIC6.62□□□□□ -1.35
SOX1O00570 RNU5E-5P-201ENST00000365379 116 ntBASIC6.62□□□□□ -1.35
SOX1O00570 RNU6-692P-201ENST00000384496 107 ntBASIC6.62□□□□□ -1.35
SOX1O00570 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SOX1O00570 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.62□□□□□ -1.35
SOX1O00570 SNORA11C-201ENST00000408532 129 ntBASIC6.62□□□□□ -1.35
SOX1O00570 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.62□□□□□ -1.35
SOX1O00570 GSTA6P-201ENST00000424144 582 ntBASIC6.62□□□□□ -1.35
SOX1O00570 PPIAP17-201ENST00000438507 471 ntBASIC6.62□□□□□ -1.35
SOX1O00570 RPS4XP4-201ENST00000443195 763 ntBASIC6.62□□□□□ -1.35
SOX1O00570 OR13K1P-201ENST00000444577 975 ntBASIC6.62□□□□□ -1.35
SOX1O00570 AL445466.1-201ENST00000448432 357 ntBASIC6.62□□□□□ -1.35
SOX1O00570 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SOX1O00570 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.62□□□□□ -1.35
SOX1O00570 RPS20P24-201ENST00000457473 361 ntBASIC6.62□□□□□ -1.35
SOX1O00570 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.62□□□□□ -1.35
SOX1O00570 RN7SL269P-201ENST00000467795 305 ntBASIC6.62□□□□□ -1.35
SOX1O00570 RPL7P6-201ENST00000480903 738 ntBASIC6.62□□□□□ -1.35
SOX1O00570 RPS4XP23-201ENST00000487801 237 ntBASIC6.62□□□□□ -1.35
SOX1O00570 AC011352.3-201ENST00000505162 593 ntBASIC6.62□□□□□ -1.35
SOX1O00570 AC117522.3-201ENST00000507974 584 ntBASIC6.62□□□□□ -1.35
SOX1O00570 SNORA43.3-201ENST00000517240 103 ntBASIC6.62□□□□□ -1.35
SOX1O00570 AP002748.2-201ENST00000528671 348 ntBASIC6.62□□□□□ -1.35
SOX1O00570 AP001858.2-201ENST00000536213 601 ntBASIC6.62□□□□□ -1.35
SOX1O00570 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.62□□□□□ -1.35
SOX1O00570 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.62□□□□□ -1.35
SOX1O00570 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.62□□□□□ -1.35
SOX1O00570 MIR3913-1-201ENST00000577744 102 ntBASIC6.62□□□□□ -1.35
SOX1O00570 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.62□□□□□ -1.35
SOX1O00570 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.62□□□□□ -1.35
SOX1O00570 AL590282.1-201ENST00000610379 1136 ntBASIC6.62□□□□□ -1.35
SOX1O00570 AC131902.3-201ENST00000611767 581 ntBASIC6.62□□□□□ -1.35
SOX1O00570 AC005332.6-201ENST00000613178 446 ntBASIC6.62□□□□□ -1.35
SOX1O00570 AL359880.1-201ENST00000621879 266 ntBASIC6.62□□□□□ -1.35
SOX1O00570 FRG1KP-201ENST00000623592 341 ntBASIC6.62□□□□□ -1.35
SOX1O00570 AC120349.2-201ENST00000625002 298 ntBASIC6.62□□□□□ -1.35
SOX1O00570 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SOX1O00570 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.62□□□□□ -1.35
SOX1O00570 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.62□□□□□ -1.35
SOX1O00570 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SOX1O00570 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SOX1O00570 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SOX1O00570 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SOX1O00570 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.62□□□□□ -1.35
SOX1O00570 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SOX1O00570 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.62□□□□□ -1.35
SOX1O00570 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
SOX1O00570 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
SOX1O00570 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX1O00570 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SOX1O00570 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.61□□□□□ -1.35
SOX1O00570 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX1O00570 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.61□□□□□ -1.35
SOX1O00570 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SOX1O00570 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.61□□□□□ -1.35
SOX1O00570 CYP1D1P-201ENST00000416662 1433 ntBASIC6.61□□□□□ -1.35
SOX1O00570 GTF2H2B-203ENST00000508065 1432 ntBASIC6.61□□□□□ -1.35
SOX1O00570 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SOX1O00570 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
SOX1O00570 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.61□□□□□ -1.35
SOX1O00570 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX1O00570 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
SOX1O00570 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX1O00570 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.61□□□□□ -1.35
SOX1O00570 RNA5SP350-201ENST00000363298 111 ntBASIC6.61□□□□□ -1.35
SOX1O00570 MT-TP-201ENST00000387461 68 ntBASIC6.61□□□□□ -1.35
SOX1O00570 AC068533.2-201ENST00000411872 306 ntBASIC6.61□□□□□ -1.35
SOX1O00570 EEF1A1P40-201ENST00000412883 573 ntBASIC6.61□□□□□ -1.35
SOX1O00570 LINC00993-201ENST00000420453 540 ntBASIC6.61□□□□□ -1.35
SOX1O00570 ELOCP14-201ENST00000428070 331 ntBASIC6.61□□□□□ -1.35
SOX1O00570 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX1O00570 CYCSP11-201ENST00000436426 315 ntBASIC6.61□□□□□ -1.35
SOX1O00570 PPIAP10-201ENST00000438675 458 ntBASIC6.61□□□□□ -1.35
SOX1O00570 ELOCP7-201ENST00000439968 331 ntBASIC6.61□□□□□ -1.35
SOX1O00570 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX1O00570 VDAC2P4-201ENST00000452925 711 ntBASIC6.61□□□□□ -1.35
SOX1O00570 RPS29P22-201ENST00000472363 168 ntBASIC6.61□□□□□ -1.35
SOX1O00570 RBM43P1-201ENST00000476891 1081 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms