Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC188H7C350 AL355852.1-201ENST00000454081 1771 ntBASIC4.93□□□□□ -1.62
CCDC188H7C350 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC188H7C350 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CCDC188H7C350 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC188H7C350 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CCDC188H7C350 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC188H7C350 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC188H7C350 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC188H7C350 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC188H7C350 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CCDC188H7C350 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC188H7C350 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCDC188H7C350 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCDC188H7C350 RNU1-94P-201ENST00000362627 173 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC188H7C350 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CCDC188H7C350 RPS27AP11-201ENST00000402798 447 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 RNU2-17P-201ENST00000410290 190 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 RN7SKP229-201ENST00000410465 302 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 RPL6P29-201ENST00000414863 865 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 CYCSP10-201ENST00000417973 294 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 CHEK2P5-201ENST00000423877 246 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 RPL21P43-201ENST00000425440 472 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 AL390879.2-203ENST00000426943 1121 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC188H7C350 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC188H7C350 ELOCP3-201ENST00000439303 348 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC188H7C350 YWHAZP2-201ENST00000440317 728 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC188H7C350 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC188H7C350 AC073587.1-201ENST00000447093 876 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CCDC188H7C350 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC188H7C350 AC023141.9-201ENST00000458734 412 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 RPL23AP56-201ENST00000460778 453 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 AC074386.1-201ENST00000476560 767 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 RN7SL717P-201ENST00000478343 297 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 AC012158.1-204ENST00000483430 465 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 AC104687.1-201ENST00000485829 412 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 AC025164.1-201ENST00000496249 478 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 AC025459.1-201ENST00000504072 156 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 AC024558.1-201ENST00000505008 528 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC188H7C350 AC008628.1-201ENST00000508663 265 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 SNORA76.2-201ENST00000517095 137 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC188H7C350 AC090151.1-201ENST00000520784 730 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC188H7C350 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC188H7C350 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC188H7C350 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC188H7C350 AC020978.7-201ENST00000575953 1187 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC188H7C350 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC188H7C350 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC188H7C350 AL137072.1-201ENST00000603444 466 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC188H7C350 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC188H7C350 AC010435.1-201ENST00000623353 1177 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC188H7C350 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC188H7C350 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC188H7C350 CCT8P1-201ENST00000413611 1657 ntBASIC4.92□□□□□ -1.62
CCDC188H7C350 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
CCDC188H7C350 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CCDC188H7C350 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CCDC188H7C350 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC188H7C350 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC188H7C350 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC188H7C350 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC188H7C350 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC188H7C350 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC188H7C350 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CCDC188H7C350 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC188H7C350 RNU1-108P-201ENST00000362556 161 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 SNORA62.2-201ENST00000364672 152 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 RNU6-650P-201ENST00000365658 111 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 RNU6-185P-201ENST00000384421 107 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 AC233289.1-201ENST00000403700 508 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 HMGB1P13-201ENST00000406019 642 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 RNU4-74P-201ENST00000411280 161 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 RPL35AP24-201ENST00000413846 330 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 AC019070.1-201ENST00000415008 1024 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 LINC01881-201ENST00000416103 412 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 EIF4EP1-201ENST00000422311 642 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 AL645608.4-201ENST00000423619 154 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 RPL21P91-201ENST00000429231 479 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC188H7C350 AL163193.1-201ENST00000444895 788 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 OR2AO1P-201ENST00000476497 403 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 RPS4XP1-201ENST00000482189 787 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 RPL23AP73-201ENST00000492507 471 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 AC111193.1-201ENST00000504097 155 ntBASIC4.91□□□□□ -1.62
CCDC188H7C350 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.91□□□□□ -1.62
CCDC188H7C350 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC188H7C350 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms