Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 AC083923.1-201ENST00000523708 376 ntBASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 OR4A43P-201ENST00000532938 908 ntBASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 PCNPP1-201ENST00000552501 511 ntBASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 MIR6133-201ENST00000617057 108 ntBASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 AC123767.1-202ENST00000620407 817 ntBASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 AL121594.5-201ENST00000631724 573 ntBASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 SEC63P2-201ENST00000503863 1939 ntBASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 MAPK10-338ENST00000641647 3362 ntBASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.2□□□□□ -1.58
TBC1D3FA6NER0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 MTCO1P7-201ENST00000419523 1542 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC007996.1-201ENST00000620414 2821 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 SNORA51.8-201ENST00000384234 132 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AL035419.1-201ENST00000397037 564 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 RN7SKP97-201ENST00000410966 333 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 PCNPP4-201ENST00000414817 517 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 RPL7P29-201ENST00000437151 728 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC073648.4-201ENST00000442655 781 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 VN1R25P-201ENST00000443385 738 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AL133244.1-201ENST00000456007 258 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 RNU7-27P-201ENST00000459281 62 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 RNU7-140P-201ENST00000459546 60 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 IGBP1P4-201ENST00000503202 879 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC112673.1-201ENST00000513168 575 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC119751.1-201ENST00000513357 765 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 CDH12P4-201ENST00000517835 295 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 CDH12P3-201ENST00000517935 295 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 CDH12P1-201ENST00000518435 295 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC022360.1-201ENST00000521058 340 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC018442.3-201ENST00000523025 183 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 LRRC6P1-201ENST00000532188 885 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC139103.1-201ENST00000534696 1030 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC011487.3-201ENST00000593607 453 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 STMN1P1-201ENST00000617809 440 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AP000676.4-201ENST00000624659 623 ntBASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TBC1D3FA6NER0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TBC1D3FA6NER0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms