Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 Z99289.3-201ENST00000605586 594 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC079395.3-201ENST00000615161 484 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC007342.8-201ENST00000623278 678 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC021106.3-201ENST00000623925 531 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 LINC01808-202ENST00000641680 1116 ntBASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TCRBV7S3A2A0A539 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 UBBP2-201ENST00000376781 231 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AP002530.1-201ENST00000405705 684 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AC105402.1-201ENST00000413336 545 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 VTA1P1-201ENST00000414044 866 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 TCEA1P4-201ENST00000415066 844 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 MTND4P3-201ENST00000417829 541 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 SLC35E1P1-201ENST00000419313 864 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 CHEK2P5-201ENST00000423877 246 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 CETN4P-201ENST00000432407 469 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AL391987.1-201ENST00000441025 200 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AL353093.1-201ENST00000441292 436 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AL161722.1-201ENST00000446972 1032 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 RHEBP2-201ENST00000450289 600 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AL035407.2-201ENST00000454090 378 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 MTCO3P35-201ENST00000485582 781 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 BX510359.5-201ENST00000515651 304 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AC104417.1-201ENST00000523974 751 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AL627230.1-201ENST00000613077 211 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AL591926.8-201ENST00000616876 211 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AC006386.1-201ENST00000619436 415 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 AC015871.5-202ENST00000623252 701 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 CCT8P1-201ENST00000413611 1657 ntBASIC5.05□□□□□ -1.6
TCRBV7S3A2A0A539 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 PROS2P-201ENST00000474651 1951 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC008549.2-201ENST00000333482 706 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 ANKRD36P1-201ENST00000344424 659 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 MIR143-201ENST00000385300 106 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 RNU2-22P-201ENST00000411266 212 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 BMS1P13-201ENST00000417301 885 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AL449283.1-202ENST00000418249 604 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 RPL36AP10-201ENST00000421785 322 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 RGS17P1-201ENST00000423358 553 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC092634.2-201ENST00000428146 1010 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 CACYBPP1-201ENST00000438592 684 ntBASIC5.04□□□□□ -1.6
TCRBV7S3A2A0A539 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms