Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 COX6CP8-201ENST00000522620 226 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AL162632.2-201ENST00000553933 399 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AC006504.6-201ENST00000590142 199 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AL136139.1-201ENST00000605568 222 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AC068234.2-201ENST00000619646 522 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 BX005040.2-201ENST00000620504 370 ntBASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 HBG1-202ENST00000632727 369 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDHGA11Q9Y5H2 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC112243.1-201ENST00000623949 3851 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 RNY1P12-201ENST00000364251 105 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 RNA5SP172-201ENST00000365061 118 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 Y_RNA.315-201ENST00000365117 102 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 SNORA20.2-201ENST00000383922 131 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 RNU6-74P-201ENST00000384235 107 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 BTBD10P2-201ENST00000404779 676 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 VN1R36P-201ENST00000414936 291 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AL592293.2-201ENST00000422292 996 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 CYP4F34P-201ENST00000425951 481 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 RPL36AP53-201ENST00000432891 316 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 RPL5P25-201ENST00000441148 775 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC016691.1-201ENST00000441321 413 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 RPS10P18-201ENST00000442662 495 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 FAM103A2P-201ENST00000444122 354 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC004980.3-201ENST00000447046 365 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 RPL23AP15-201ENST00000450202 459 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AL645937.3-201ENST00000453647 936 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 RPL31P50-201ENST00000471002 296 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 GAPDHP56-201ENST00000506031 988 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 SNORA40.12-201ENST00000516329 111 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC027667.1-201ENST00000545814 304 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 HMGB1P6-201ENST00000569046 646 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 ARGFXP2-201ENST00000579304 949 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 MAGOH2P-202ENST00000584384 429 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 OR7E19P-202ENST00000589942 844 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 BBIP1P1-201ENST00000602999 279 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC007255.2-201ENST00000604053 631 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 CYCSP1-201ENST00000604815 315 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC063962.1-201ENST00000608199 521 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC004839.1-201ENST00000610269 501 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC009248.2-201ENST00000619826 254 ntBASIC6.81□□□□□ -1.32
PCDHGA11Q9Y5H2 AC079684.1-201ENST00000621405 437 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms