Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 YWHAEP1-201ENST00000453697 763 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC009127.1-201ENST00000467090 155 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 RN7SL97P-201ENST00000486780 299 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC027544.3-201ENST00000535082 757 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC027455.1-201ENST00000574104 594 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 MTCO3P22-201ENST00000603219 784 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 PSMA6P4-201ENST00000603247 718 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC008638.3-201ENST00000603341 463 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC005229.3-201ENST00000603438 323 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC090953.1-201ENST00000604305 1092 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC100767.2-201ENST00000604840 693 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC005377.1-201ENST00000605126 456 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC012557.1-201ENST00000607115 611 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC007342.8-201ENST00000623278 678 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AL353662.3-201ENST00000625131 237 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 AP001486.2-201ENST00000561652 5113 ntBASIC3.98□□□□□ -1.77
KCNIP3Q9Y2W7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 AC007390.2-201ENST00000606229 3803 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 SNORA17.1-201ENST00000362945 126 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 RN7SKP115-201ENST00000363177 317 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 MIR3074-201ENST00000384885 81 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 MIR92A2-201ENST00000385299 75 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 DDX39BP1-205ENST00000422507 192 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 ATP5A1P8-201ENST00000423669 1291 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 AL158073.1-201ENST00000426848 1104 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 EEF1A1P1-201ENST00000447052 739 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 RN7SL547P-201ENST00000490793 290 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 SUMO1P1-201ENST00000497904 306 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 APOBEC3AP1-201ENST00000511396 287 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 SNORD46.2-201ENST00000516021 102 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 TOMM20P1-201ENST00000534518 427 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 AC105254.2-201ENST00000603636 436 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 AC100814.1-201ENST00000606963 623 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 AC005840.5-201ENST00000619166 599 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 AC099494.2-201ENST00000623371 978 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 CCT8P1-201ENST00000413611 1657 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 LINC02471-203ENST00000641941 4752 ntBASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
KCNIP3Q9Y2W7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
KCNIP3Q9Y2W7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
KCNIP3Q9Y2W7 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.96□□□□□ -1.77
KCNIP3Q9Y2W7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
KCNIP3Q9Y2W7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.77
KCNIP3Q9Y2W7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
KCNIP3Q9Y2W7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.77
KCNIP3Q9Y2W7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 RNU4-39P-201ENST00000362455 127 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 RNA5SP284-201ENST00000384547 118 ntBASIC3.96□□□□□ -1.78
KCNIP3Q9Y2W7 RPS20P25-201ENST00000412447 352 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms