Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.45
NPC1L1Q9UHC9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
NPC1L1Q9UHC9 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.96□□□□□ -1.46
NPC1L1Q9UHC9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NPC1L1Q9UHC9 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
NPC1L1Q9UHC9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NPC1L1Q9UHC9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NPC1L1Q9UHC9 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
NPC1L1Q9UHC9 MFSD8-220ENST00000641243 1422 ntBASIC5.96□□□□□ -1.46
NPC1L1Q9UHC9 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 AC097374.1-203ENST00000400783 485 ntBASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 OR13Z1P-201ENST00000416141 834 ntBASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 KPNA2P3-201ENST00000584190 848 ntBASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 SLC25A36P1-201ENST00000590111 465 ntBASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 AC015849.6-201ENST00000605454 474 ntBASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 Z98200.1-201ENST00000607298 470 ntBASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 AC083843.3-201ENST00000623679 2186 ntBASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NPC1L1Q9UHC9 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 RNA5SP515-201ENST00000364570 118 ntBASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 RPL23AP25-201ENST00000430973 463 ntBASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 RPL23AP52-201ENST00000439311 478 ntBASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 AC093824.1-201ENST00000508796 343 ntBASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 CCT8P1-201ENST00000413611 1657 ntBASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NPC1L1Q9UHC9 MIR331-201ENST00000362302 94 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AL583835.1-201ENST00000399570 407 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 SEPT7P8-201ENST00000413308 775 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 BTG3P1-201ENST00000435859 716 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 VN1R96P-201ENST00000446052 858 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 RPS27AP15-201ENST00000447672 466 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AL592156.1-201ENST00000508758 304 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AC026402.1-201ENST00000513642 170 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 EIF4EP5-201ENST00000528228 640 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 FP325313.1-201ENST00000638228 703 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AC020633.1-201ENST00000468439 2247 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 AC012078.1-201ENST00000405035 1646 ntBASIC5.93□□□□□ -1.46
NPC1L1Q9UHC9 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms