Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 HDGFP1-201ENST00000405943 252 ntBASIC4.63□□□□□ -1.67
CISHQ9NSE2 RN7SKP199-201ENST00000410325 305 ntBASIC4.63□□□□□ -1.67
CISHQ9NSE2 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.63□□□□□ -1.67
CISHQ9NSE2 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 AL132765.1-201ENST00000434165 553 ntBASIC4.63□□□□□ -1.67
CISHQ9NSE2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.63□□□□□ -1.67
CISHQ9NSE2 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 TRAV8-5-201ENST00000537369 341 ntBASIC4.63□□□□□ -1.67
CISHQ9NSE2 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CISHQ9NSE2 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CISHQ9NSE2 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 AC090515.3-201ENST00000560431 315 ntBASIC4.63□□□□□ -1.67
CISHQ9NSE2 MIR4277-201ENST00000578298 84 ntBASIC4.63□□□□□ -1.67
CISHQ9NSE2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 MIR6748-201ENST00000610433 71 ntBASIC4.63□□□□□ -1.67
CISHQ9NSE2 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.63□□□□□ -1.67
CISHQ9NSE2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.63□□□□□ -1.67
CISHQ9NSE2 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
CISHQ9NSE2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CISHQ9NSE2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CISHQ9NSE2 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CISHQ9NSE2 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 SCN1A-220ENST00000641603 12506 ntBASIC4.63□□□□□ -1.67
CISHQ9NSE2 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CISHQ9NSE2 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CISHQ9NSE2 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CISHQ9NSE2 AC093849.1-201ENST00000563631 2209 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CISHQ9NSE2 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 XKRY2-202ENST00000623874 1581 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 XKRY-202ENST00000624960 1581 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 RNA5SP509-201ENST00000364577 119 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 SNORD66.1-201ENST00000391230 76 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CISHQ9NSE2 CBX1P3-201ENST00000413296 527 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 AL807761.1-201ENST00000417622 171 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 AL592293.2-201ENST00000422292 996 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 CBX1P1-201ENST00000440184 427 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 ABCF2P2-201ENST00000450549 296 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 PSMC1P13-201ENST00000458195 985 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CISHQ9NSE2 TCP11X3P-202ENST00000514289 1254 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 RAB9BP1-201ENST00000519581 626 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 AC009643.1-201ENST00000532030 391 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 AC019278.1-201ENST00000623516 479 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CISHQ9NSE2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
CISHQ9NSE2 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CISHQ9NSE2 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CISHQ9NSE2 DDX18P4-201ENST00000511690 1966 ntBASIC4.62□□□□□ -1.67
CISHQ9NSE2 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CISHQ9NSE2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CISHQ9NSE2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 AC067945.1-201ENST00000342609 618 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 NRBF2P2-201ENST00000413087 861 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 RPL18P10-201ENST00000425606 538 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 AC073335.1-201ENST00000427776 363 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 AC023141.6-201ENST00000429418 337 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 RPS3AP54-201ENST00000435535 734 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 EIF2S2P2-201ENST00000447161 982 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 AC008694.2-201ENST00000517591 306 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 AC034205.1-201ENST00000520621 638 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 C1GALT1P3-201ENST00000522049 819 ntBASIC4.61□□□□□ -1.67
CISHQ9NSE2 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.61□□□□□ -1.67
CISHQ9NSE2 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms