Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AL160175.1-201ENST00000428124 247 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AL451139.1-201ENST00000434718 346 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC069285.2-201ENST00000440210 275 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 OR7E125P-201ENST00000443450 846 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AP000281.1-201ENST00000444036 316 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC073109.1-201ENST00000445066 978 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 RPL31P15-201ENST00000449770 338 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 MYO5BP2-201ENST00000449815 1277 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 RPL7P48-201ENST00000461513 746 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 RN7SL649P-201ENST00000496974 275 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 RNU6-760P-201ENST00000516078 97 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 RNU6-709P-201ENST00000517257 104 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 MYL12AP1-201ENST00000518490 515 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 RBM7-208ENST00000545678 867 ntTSL 3 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 TVP23CP2-201ENST00000571473 623 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 MTND6P33-201ENST00000571794 183 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AL121834.1-201ENST00000572284 509 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 HMGB2P1-201ENST00000591146 634 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AL133247.2-201ENST00000603236 482 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC095055.1-201ENST00000603472 1113 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC005377.1-201ENST00000605126 456 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC091979.2-201ENST00000607514 214 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AL355816.1-201ENST00000607951 118 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 RNA5SP440-201ENST00000612665 119 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 AC127024.6-201ENST00000621598 424 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 LINC00216-201ENST00000623548 1126 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 CYP4Z2P-201ENST00000423332 1512 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 RNF6P1-201ENST00000444889 1784 ntBASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SND1-IT1Q9HBX3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 OR56B2P-201ENST00000317102 954 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 TMSB4XP4-201ENST00000323496 618 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 SNORA17.1-201ENST00000362945 126 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 SNORA62.2-201ENST00000364672 152 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 LAP3P1-201ENST00000403648 294 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 RNU4-74P-201ENST00000411280 161 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC105402.1-201ENST00000413336 545 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 RANP4-201ENST00000413361 655 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 DDX39BP1-205ENST00000422507 192 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 Z74021.1-201ENST00000423610 407 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC005033.1-201ENST00000428904 813 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 RPL7L1P9-201ENST00000431298 745 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AL031663.1-201ENST00000437445 219 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 CBX1P4-201ENST00000439415 457 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AL161636.2-201ENST00000445179 927 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 KNOP1P3-201ENST00000446933 426 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 TPMTP4-201ENST00000450749 678 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC006511.1-201ENST00000470614 315 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 RN7SL184P-201ENST00000488308 297 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 SUMO1P1-201ENST00000497904 306 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 AC024405.1-201ENST00000532521 1042 ntBASIC3.16□□□□□ -1.9
SND1-IT1Q9HBX3 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms