Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SLC44A1Q8WWI5 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SLC44A1Q8WWI5 MTND5P11-201ENST00000511037 1812 ntBASIC4.92□□□□□ -1.62
SLC44A1Q8WWI5 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SLC44A1Q8WWI5 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.92□□□□□ -1.62
SLC44A1Q8WWI5 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SLC44A1Q8WWI5 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC44A1Q8WWI5 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC007342.7-201ENST00000624610 2337 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 PABPC1P6-201ENST00000445594 1829 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 SNORA72.3-201ENST00000365074 132 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 MT-TP-201ENST00000387461 68 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 RNU6-1000P-201ENST00000391066 106 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 HMGB1P10-201ENST00000395823 563 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 CHMP1B2P-201ENST00000399581 597 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 DUTP5-201ENST00000406790 469 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 BX664727.1-201ENST00000416024 466 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 DDX39BP1-205ENST00000422507 192 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 FABP7P1-201ENST00000424004 391 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 NDUFA5P10-201ENST00000432147 357 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 HMGB3P10-201ENST00000434734 572 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC004938.1-201ENST00000438468 308 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 TDGF1P1-201ENST00000445734 527 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC000111.2-201ENST00000448200 210 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 RPL7P55-201ENST00000450522 746 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC092647.2-201ENST00000452998 253 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 RPL7AP10-201ENST00000481016 791 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 RPL7P39-201ENST00000481157 744 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 RN7SL30P-201ENST00000488416 306 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC008953.1-201ENST00000497334 318 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC087888.1-201ENST00000550884 1254 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 NMNAT1P1-201ENST00000554095 876 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC104229.1-201ENST00000561364 255 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AL512329.2-201ENST00000607350 548 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC008115.4-201ENST00000619780 775 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC007275.1-201ENST00000621243 671 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC015804.1-201ENST00000622935 435 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC099494.2-201ENST00000623371 978 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC008432.1-201ENST00000615912 1320 ntBASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC44A1Q8WWI5 AC008758.3-201ENST00000507003 1829 ntBASIC4.9□□□□□ -1.62
SLC44A1Q8WWI5 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC44A1Q8WWI5 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SLC44A1Q8WWI5 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC44A1Q8WWI5 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC44A1Q8WWI5 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.62
SLC44A1Q8WWI5 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.9□□□□□ -1.62
SLC44A1Q8WWI5 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SLC44A1Q8WWI5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC44A1Q8WWI5 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 RNU4-7P-201ENST00000364758 141 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AL357515.1-201ENST00000402967 542 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 RN7SKP126-201ENST00000411143 300 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 DPPA2P3-201ENST00000411853 655 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 AL358176.3-201ENST00000420757 454 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 SFR1P2-201ENST00000421841 730 ntBASIC4.9□□□□□ -1.63
SLC44A1Q8WWI5 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms