Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 RNU1-94P-201ENST00000362627 173 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 MIR621-201ENST00000384919 96 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 OR1F12-201ENST00000402365 945 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AL357515.1-201ENST00000402967 542 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 VN1R12P-201ENST00000403778 876 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 TBCAP2-201ENST00000416175 326 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 Z74021.1-201ENST00000423610 407 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 RPL7L1P9-201ENST00000431298 745 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AL606490.7-201ENST00000433136 191 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 RPS17P8-201ENST00000434525 335 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 MTND2P21-201ENST00000436242 1042 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 RN7SL168P-201ENST00000463821 279 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AC097484.1-201ENST00000471148 389 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 RPL37P23-201ENST00000492641 294 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 MTCO1P31-201ENST00000506355 492 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 RNU6-1308P-201ENST00000516817 103 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AP003168.1-201ENST00000530091 307 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AC024405.1-201ENST00000532521 1042 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 NPM1P35-201ENST00000533043 868 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 RN7SL176P-201ENST00000580352 264 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AC027243.2-201ENST00000602530 724 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AL139286.1-201ENST00000604465 483 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AC008966.2-201ENST00000606157 453 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AL162574.2-201ENST00000614618 657 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AL162233.1-201ENST00000620014 944 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 RPL23AP61-201ENST00000623642 466 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 AL672167.1-203ENST00000641299 2975 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 MTND4P26-201ENST00000415971 1359 ntBASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC71LQ8N9Z2 CYP4Z2P-201ENST00000423332 1512 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 RN7SKP115-201ENST00000363177 317 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 RN7SKP44-201ENST00000363602 316 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 RNU1-43P-201ENST00000365052 165 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 RNU6-40P-201ENST00000384254 107 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 RNU6-31P-201ENST00000384388 108 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 LAP3P1-201ENST00000403648 294 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 RNA5SP345-201ENST00000410646 108 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 RPL24P2-201ENST00000421023 475 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 IPPKP1-201ENST00000422501 768 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 RPL31P15-201ENST00000449770 338 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 HMGB1P3-201ENST00000502802 616 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AC018797.3-201ENST00000513388 1241 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 IGHVII-44-2-201ENST00000517728 250 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AL049839.1-201ENST00000556151 657 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AC084757.1-201ENST00000559987 490 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AL121932.1-201ENST00000605542 214 ntBASIC3.95□□□□□ -1.78
CCDC71LQ8N9Z2 AC015802.5-201ENST00000607478 399 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms