Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 AL162574.1-201ENST00000615702 950 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 AC093648.1-201ENST00000623546 606 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 AL356121.2-201ENST00000624715 780 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 ZNF663P-202ENST00000641770 1131 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 AL442128.2-201ENST00000620246 1824 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 AC025470.1-201ENST00000510053 2032 ntBASIC5.38□□□□□ -1.55
VRK3Q8IV63 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
VRK3Q8IV63 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
VRK3Q8IV63 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VRK3Q8IV63 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VRK3Q8IV63 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 BRAFP1-201ENST00000445336 2703 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC125336.1-201ENST00000508893 2827 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VRK3Q8IV63 RNU1-87P-201ENST00000363727 170 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 RNU4-2-201ENST00000365668 141 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VRK3Q8IV63 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 PEX12P1-201ENST00000400284 1048 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 RNU2-16P-201ENST00000410712 136 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AL663109.1-201ENST00000411498 844 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AL133482.1-201ENST00000415988 498 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AL354868.1-201ENST00000417077 482 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 C1DP1-201ENST00000426049 402 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 DPRXP1-201ENST00000426312 460 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 GTF2IP7-202ENST00000436677 309 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC073465.2-201ENST00000440938 498 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 MTCO1P19-201ENST00000443487 500 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VRK3Q8IV63 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 RPSAP39-201ENST00000467439 883 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 RN7SL188P-201ENST00000469842 285 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VRK3Q8IV63 RPL30P6-201ENST00000475925 342 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC012123.2-201ENST00000485809 248 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 RN7SL466P-201ENST00000497546 295 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC008565.1-201ENST00000509046 885 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 DUXAP1-201ENST00000556632 463 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AL512347.1-201ENST00000566420 503 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC010547.7-201ENST00000570323 333 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC107982.3-201ENST00000584957 985 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC080013.4-201ENST00000607624 649 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AL359513.1-201ENST00000614364 557 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AC009878.1-201ENST00000621819 340 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AL691477.1-201ENST00000624398 162 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VRK3Q8IV63 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 AL929601.4-201ENST00000613011 1341 ntBASIC5.37□□□□□ -1.55
VRK3Q8IV63 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VRK3Q8IV63 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VRK3Q8IV63 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VRK3Q8IV63 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VRK3Q8IV63 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
VRK3Q8IV63 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms