Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 SNORA68.2-201ENST00000391263 128 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 RNA5SP296-201ENST00000410523 111 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC013404.1-201ENST00000413068 249 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 LINC01347-201ENST00000417964 355 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 SEC63P1-201ENST00000425785 1258 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 EIF2S2P3-201ENST00000428356 999 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 COX6CP13-201ENST00000428703 226 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AL353597.2-202ENST00000434901 373 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 RPL35AP21-201ENST00000437667 333 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 KNOP1P3-201ENST00000446933 426 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 EIF4A1P11-201ENST00000451239 222 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AL356981.1-201ENST00000454879 684 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 RN7SL443P-201ENST00000464331 290 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC083982.1-201ENST00000485679 344 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC025260.1-201ENST00000548858 430 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 RN7SL435P-201ENST00000584418 282 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 VN1R84P-201ENST00000593697 235 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC079610.2-201ENST00000604818 690 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 MIR7973-1-201ENST00000614683 76 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AC116563.2-201ENST00000624751 535 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 ZNF652P1-201ENST00000442420 1309 ntBASIC5.16□□□□□ -1.58
PRPF39Q86UA1 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.16□□□□□ -1.58
PRPF39Q86UA1 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PRPF39Q86UA1 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PRPF39Q86UA1 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PRPF39Q86UA1 SMG1P6-201ENST00000532337 2930 ntBASIC5.15□□□□□ -1.58
PRPF39Q86UA1 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PRPF39Q86UA1 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PRPF39Q86UA1 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PRPF39Q86UA1 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 RN7SKP115-201ENST00000363177 317 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 UBBP2-201ENST00000376781 231 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 Z97832.1-201ENST00000402490 328 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AC009965.2-201ENST00000425328 970 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AC104837.2-201ENST00000427236 424 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 RPS24P8-201ENST00000431490 402 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 PRPF38AP2-201ENST00000438179 851 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 MRPL35P2-201ENST00000448009 511 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 TRY2P-201ENST00000448860 689 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 RPS3AP41-201ENST00000462701 778 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 HMGB3P16-201ENST00000508037 287 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AP003049.1-201ENST00000529418 457 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AC006272.2-201ENST00000594725 163 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AC010200.2-201ENST00000605098 235 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AC015914.2-201ENST00000618167 288 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 MTND5P11-201ENST00000511037 1812 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AL034370.1-201ENST00000397254 1590 ntBASIC5.15□□□□□ -1.59
PRPF39Q86UA1 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.15□□□□□ -1.59
PRPF39Q86UA1 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms