Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AL035458.1-201ENST00000433096 585 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 PMCHL2-203ENST00000457791 237 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 MTND1P16-201ENST00000465177 898 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 RN7SL174P-201ENST00000475578 289 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC114728.1-201ENST00000488289 483 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 NPM1P27-201ENST00000502784 830 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 CCDC11P1-201ENST00000503137 1162 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 HMGB1P44-201ENST00000508597 572 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC027308.1-201ENST00000517993 110 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 NPM1P5-201ENST00000557228 838 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 RPS3AP23-202ENST00000574601 686 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 GLYATL1P2-202ENST00000588046 902 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 AP001542.2-201ENST00000593141 364 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC018816.2-201ENST00000621460 353 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC138305.3-201ENST00000624988 240 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 ZNF402P-201ENST00000404435 3100 ntBASIC6.59□□□□□ -1.35
RNF43Q68DV7 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RNF43Q68DV7 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.59□□□□□ -1.35
RNF43Q68DV7 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
RNF43Q68DV7 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RNF43Q68DV7 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RNF43Q68DV7 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF43Q68DV7 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 AL645937.1-201ENST00000641739 1652 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF43Q68DV7 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF43Q68DV7 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 RNU6-1090P-201ENST00000364065 94 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 Y_RNA.402-201ENST00000383972 102 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 HMGA1P8-201ENST00000414130 321 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 AL121878.1-201ENST00000418638 859 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 OSTCP4-201ENST00000424397 449 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 RPL12P12-201ENST00000424633 501 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 AL354707.3-201ENST00000427308 331 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 BRWD1P3-201ENST00000428816 390 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 AC094019.1-201ENST00000434678 472 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF43Q68DV7 RAB28P3-201ENST00000448325 597 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 RPS4XP15-201ENST00000489210 795 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF43Q68DV7 ZNF519P4-201ENST00000514008 125 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 NANOGNBP2-201ENST00000544753 553 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 AC073916.1-201ENST00000545095 130 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RNF43Q68DV7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.58□□□□□ -1.36
RNF43Q68DV7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF43Q68DV7 AL009028.1-201ENST00000604895 802 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 SNORA74.4-201ENST00000607595 199 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 AP001437.1-201ENST00000608783 456 ntBASIC6.58□□□□□ -1.36
RNF43Q68DV7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RNF43Q68DV7 AL445264.1-201ENST00000621719 171 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms