Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 NACA3P-201ENST00000359690 648 ntBASIC5.03□□□□□ -1.6
RAE1P78406 RNU6-1339P-201ENST00000363574 91 ntBASIC5.03□□□□□ -1.6
RAE1P78406 U3.7-201ENST00000363668 216 ntBASIC5.03□□□□□ -1.6
RAE1P78406 RN7SKP15-201ENST00000364742 309 ntBASIC5.03□□□□□ -1.6
RAE1P78406 RN7SKP153-201ENST00000365026 316 ntBASIC5.03□□□□□ -1.6
RAE1P78406 SNORD116.1-201ENST00000365628 92 ntBASIC5.03□□□□□ -1.6
RAE1P78406 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAE1P78406 RNU6-83P-201ENST00000384568 112 ntBASIC5.03□□□□□ -1.6
RAE1P78406 RNU1-77P-201ENST00000390868 162 ntBASIC5.03□□□□□ -1.6
RAE1P78406 OOSP1-201ENST00000398992 1270 ntBASIC5.03□□□□□ -1.6
RAE1P78406 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.03□□□□□ -1.6
RAE1P78406 AC104843.2-201ENST00000427666 297 ntBASIC5.03□□□□□ -1.6
RAE1P78406 MOB1AP1-201ENST00000430903 535 ntBASIC5.03□□□□□ -1.6
RAE1P78406 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.03□□□□□ -1.6
RAE1P78406 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.03□□□□□ -1.6
RAE1P78406 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.03□□□□□ -1.6
RAE1P78406 AC007327.1-201ENST00000447461 264 ntBASIC5.03□□□□□ -1.6
RAE1P78406 ATG12P2-201ENST00000456830 416 ntBASIC5.03□□□□□ -1.6
RAE1P78406 AC079168.1-201ENST00000458741 345 ntBASIC5.03□□□□□ -1.6
RAE1P78406 RN7SL547P-201ENST00000490793 290 ntBASIC5.03□□□□□ -1.6
RAE1P78406 AC022133.1-201ENST00000490961 571 ntBASIC5.03□□□□□ -1.6
RAE1P78406 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.03□□□□□ -1.6
RAE1P78406 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.03□□□□□ -1.6
RAE1P78406 RNA5SP230-201ENST00000517039 122 ntBASIC5.03□□□□□ -1.6
RAE1P78406 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.03□□□□□ -1.6
RAE1P78406 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RAE1P78406 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.03□□□□□ -1.6
RAE1P78406 SETP1-201ENST00000556014 845 ntBASIC5.03□□□□□ -1.6
RAE1P78406 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.03□□□□□ -1.6
RAE1P78406 RPL10P14-201ENST00000565265 298 ntBASIC5.03□□□□□ -1.6
RAE1P78406 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.03□□□□□ -1.6
RAE1P78406 MIR4660-201ENST00000583549 74 ntBASIC5.03□□□□□ -1.6
RAE1P78406 AC040904.1-201ENST00000590850 223 ntBASIC5.03□□□□□ -1.6
RAE1P78406 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.03□□□□□ -1.6
RAE1P78406 AC125494.2-201ENST00000602431 657 ntBASIC5.03□□□□□ -1.6
RAE1P78406 AC008814.1-201ENST00000603797 406 ntBASIC5.03□□□□□ -1.6
RAE1P78406 Z94722.1-201ENST00000604328 474 ntBASIC5.03□□□□□ -1.6
RAE1P78406 DPRXP5-201ENST00000604662 539 ntBASIC5.03□□□□□ -1.6
RAE1P78406 AL360219.1-201ENST00000610230 366 ntBASIC5.03□□□□□ -1.6
RAE1P78406 AP000255.1-201ENST00000610276 676 ntBASIC5.03□□□□□ -1.6
RAE1P78406 AL158163.2-201ENST00000619110 700 ntBASIC5.03□□□□□ -1.6
RAE1P78406 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RAE1P78406 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
RAE1P78406 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAE1P78406 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RAE1P78406 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAE1P78406 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.03□□□□□ -1.6
RAE1P78406 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RAE1P78406 CASC19-248ENST00000641674 1356 ntBASIC5.03□□□□□ -1.6
RAE1P78406 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RAE1P78406 SMG1P7-201ENST00000565246 2704 ntBASIC5.03□□□□□ -1.6
RAE1P78406 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RAE1P78406 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
RAE1P78406 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.02□□□□□ -1.61
RAE1P78406 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RAE1P78406 AL121839.2-201ENST00000565058 6943 ntBASIC5.02□□□□□ -1.61
RAE1P78406 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RAE1P78406 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RAE1P78406 FAM133CP-201ENST00000332869 704 ntBASIC5.02□□□□□ -1.61
RAE1P78406 Y_RNA.169-201ENST00000363745 96 ntBASIC5.02□□□□□ -1.61
RAE1P78406 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
RAE1P78406 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.02□□□□□ -1.61
RAE1P78406 MIR525-201ENST00000384978 85 ntBASIC5.02□□□□□ -1.61
RAE1P78406 RNA5SP339-201ENST00000390987 122 ntBASIC5.02□□□□□ -1.61
RAE1P78406 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RAE1P78406 HSPA8P15-201ENST00000401676 786 ntBASIC5.02□□□□□ -1.61
RAE1P78406 SFR1P1-201ENST00000403720 688 ntBASIC5.02□□□□□ -1.61
RAE1P78406 AL390774.1-201ENST00000411924 246 ntBASIC5.02□□□□□ -1.61
RAE1P78406 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.02□□□□□ -1.61
RAE1P78406 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.02□□□□□ -1.61
RAE1P78406 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.02□□□□□ -1.61
RAE1P78406 AP001324.1-201ENST00000428553 399 ntBASIC5.02□□□□□ -1.61
RAE1P78406 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.02□□□□□ -1.61
RAE1P78406 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.02□□□□□ -1.61
RAE1P78406 CLUHP1-201ENST00000435012 1190 ntBASIC5.02□□□□□ -1.61
RAE1P78406 AC234064.1-201ENST00000436312 247 ntBASIC5.02□□□□□ -1.61
RAE1P78406 CYCSP12-201ENST00000437729 300 ntBASIC5.02□□□□□ -1.61
RAE1P78406 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.02□□□□□ -1.61
RAE1P78406 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.02□□□□□ -1.61
RAE1P78406 AC096741.1-201ENST00000472250 846 ntBASIC5.02□□□□□ -1.61
RAE1P78406 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.02□□□□□ -1.61
RAE1P78406 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.02□□□□□ -1.61
RAE1P78406 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.02□□□□□ -1.61
RAE1P78406 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.02□□□□□ -1.61
RAE1P78406 HMGB1P40-201ENST00000525121 540 ntBASIC5.02□□□□□ -1.61
RAE1P78406 AP000926.4-201ENST00000527351 454 ntBASIC5.02□□□□□ -1.61
RAE1P78406 MTND2P26-201ENST00000528255 1029 ntBASIC5.02□□□□□ -1.61
RAE1P78406 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.02□□□□□ -1.61
RAE1P78406 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.02□□□□□ -1.61
RAE1P78406 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.02□□□□□ -1.61
RAE1P78406 AC126177.5-201ENST00000549599 178 ntBASIC5.02□□□□□ -1.61
RAE1P78406 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.02□□□□□ -1.61
RAE1P78406 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.02□□□□□ -1.61
RAE1P78406 AADACP1-206ENST00000561502 1193 ntBASIC5.02□□□□□ -1.61
RAE1P78406 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.02□□□□□ -1.61
RAE1P78406 AC019322.1-201ENST00000571869 389 ntBASIC5.02□□□□□ -1.61
RAE1P78406 MIR5708-201ENST00000579723 85 ntBASIC5.02□□□□□ -1.61
RAE1P78406 MRPS35P3-201ENST00000603189 709 ntBASIC5.02□□□□□ -1.61
RAE1P78406 AC009597.2-201ENST00000604659 592 ntBASIC5.02□□□□□ -1.61
RAE1P78406 AL133507.1-201ENST00000605269 557 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms