Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CPHL1P-201ENST00000461341 3407 ntBASIC4.97□□□□□ -1.61
TPM4P67936 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TPM4P67936 AC016588.2-201ENST00000632484 3021 ntBASIC4.97□□□□□ -1.61
TPM4P67936 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TPM4P67936 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.96□□□□□ -1.61
TPM4P67936 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.96□□□□□ -1.61
TPM4P67936 AC097504.1-201ENST00000515103 2415 ntBASIC4.96□□□□□ -1.61
TPM4P67936 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TPM4P67936 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TPM4P67936 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
TPM4P67936 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.96□□□□□ -1.62
TPM4P67936 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TPM4P67936 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.96□□□□□ -1.62
TPM4P67936 MIR708-201ENST00000390708 88 ntBASIC4.96□□□□□ -1.62
TPM4P67936 RPL23AP48-201ENST00000406913 488 ntBASIC4.96□□□□□ -1.62
TPM4P67936 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.96□□□□□ -1.62
TPM4P67936 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.96□□□□□ -1.62
TPM4P67936 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TPM4P67936 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.96□□□□□ -1.62
TPM4P67936 TRY2P-201ENST00000448860 689 ntBASIC4.96□□□□□ -1.62
TPM4P67936 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.96□□□□□ -1.62
TPM4P67936 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.96□□□□□ -1.62
TPM4P67936 BX284632.1-201ENST00000478218 541 ntBASIC4.96□□□□□ -1.62
TPM4P67936 RN7SL809P-201ENST00000482040 297 ntBASIC4.96□□□□□ -1.62
TPM4P67936 AC007016.1-201ENST00000512110 244 ntBASIC4.96□□□□□ -1.62
TPM4P67936 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
TPM4P67936 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.96□□□□□ -1.62
TPM4P67936 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.96□□□□□ -1.62
TPM4P67936 UBTFL9-201ENST00000534504 1148 ntBASIC4.96□□□□□ -1.62
TPM4P67936 AP001880.2-201ENST00000538233 448 ntBASIC4.96□□□□□ -1.62
TPM4P67936 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.96□□□□□ -1.62
TPM4P67936 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.96□□□□□ -1.62
TPM4P67936 HAUS8P1-201ENST00000549005 542 ntBASIC4.96□□□□□ -1.62
TPM4P67936 EDDM3DP-201ENST00000554692 434 ntBASIC4.96□□□□□ -1.62
TPM4P67936 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.96□□□□□ -1.62
TPM4P67936 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TPM4P67936 AC103858.2-201ENST00000621471 543 ntBASIC4.96□□□□□ -1.62
TPM4P67936 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.96□□□□□ -1.62
TPM4P67936 AP002799.1-201ENST00000623552 423 ntBASIC4.96□□□□□ -1.62
TPM4P67936 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.96□□□□□ -1.62
TPM4P67936 LINC01808-202ENST00000641680 1116 ntBASIC4.96□□□□□ -1.62
TPM4P67936 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TPM4P67936 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.96□□□□□ -1.62
TPM4P67936 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
TPM4P67936 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TPM4P67936 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
TPM4P67936 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TPM4P67936 U8.4-201ENST00000363626 134 ntBASIC4.95□□□□□ -1.62
TPM4P67936 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TPM4P67936 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TPM4P67936 RAB5CP1-201ENST00000395972 580 ntBASIC4.95□□□□□ -1.62
TPM4P67936 OR1F12-201ENST00000402365 945 ntBASIC4.95□□□□□ -1.62
TPM4P67936 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.95□□□□□ -1.62
TPM4P67936 RAC1P3-201ENST00000416129 580 ntBASIC4.95□□□□□ -1.62
TPM4P67936 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TPM4P67936 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.95□□□□□ -1.62
TPM4P67936 AC079807.1-201ENST00000429993 481 ntBASIC4.95□□□□□ -1.62
TPM4P67936 YWHAEP5-201ENST00000431545 765 ntBASIC4.95□□□□□ -1.62
TPM4P67936 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.95□□□□□ -1.62
TPM4P67936 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TPM4P67936 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.95□□□□□ -1.62
TPM4P67936 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TPM4P67936 AC139783.2-201ENST00000504847 1145 ntBASIC4.95□□□□□ -1.62
TPM4P67936 BTF3P13-201ENST00000513224 490 ntBASIC4.95□□□□□ -1.62
TPM4P67936 RNA5SP228-201ENST00000516232 133 ntBASIC4.95□□□□□ -1.62
TPM4P67936 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.95□□□□□ -1.62
TPM4P67936 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.95□□□□□ -1.62
TPM4P67936 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.95□□□□□ -1.62
TPM4P67936 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.95□□□□□ -1.62
TPM4P67936 AC011445.2-201ENST00000599274 173 ntBASIC4.95□□□□□ -1.62
TPM4P67936 AC008536.1-201ENST00000602872 669 ntBASIC4.95□□□□□ -1.62
TPM4P67936 AC026368.1-201ENST00000614934 690 ntBASIC4.95□□□□□ -1.62
TPM4P67936 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.95□□□□□ -1.62
TPM4P67936 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.95□□□□□ -1.62
TPM4P67936 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TPM4P67936 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TPM4P67936 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
TPM4P67936 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TPM4P67936 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TPM4P67936 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
TPM4P67936 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
TPM4P67936 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TPM4P67936 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TPM4P67936 CUL4AP1-201ENST00000514750 1863 ntBASIC4.94□□□□□ -1.62
TPM4P67936 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TPM4P67936 DDX18P3-201ENST00000404856 2007 ntBASIC4.94□□□□□ -1.62
TPM4P67936 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TPM4P67936 RNA5SP305-201ENST00000362665 119 ntBASIC4.94□□□□□ -1.62
TPM4P67936 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TPM4P67936 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.94□□□□□ -1.62
TPM4P67936 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.94□□□□□ -1.62
TPM4P67936 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.94□□□□□ -1.62
TPM4P67936 RPS20P14-201ENST00000412545 360 ntBASIC4.94□□□□□ -1.62
TPM4P67936 RSU1P3-201ENST00000412878 835 ntBASIC4.94□□□□□ -1.62
TPM4P67936 MTND4LP21-201ENST00000415303 295 ntBASIC4.94□□□□□ -1.62
TPM4P67936 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.94□□□□□ -1.62
TPM4P67936 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TPM4P67936 RBMY1KP-201ENST00000423480 476 ntBASIC4.94□□□□□ -1.62
TPM4P67936 ELOCP18-201ENST00000434209 337 ntBASIC4.94□□□□□ -1.62
TPM4P67936 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms