Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RN7SKP276-201ENST00000516242 268 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.08□□□□□ -1.76
LMO4P61968 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.08□□□□□ -1.76
LMO4P61968 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.08□□□□□ -1.76
LMO4P61968 C1DP5-201ENST00000525775 383 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AP001880.2-201ENST00000538233 448 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.08□□□□□ -1.76
LMO4P61968 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.08□□□□□ -1.76
LMO4P61968 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.08□□□□□ -1.76
LMO4P61968 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LMO4P61968 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.08□□□□□ -1.76
LMO4P61968 MTCO2P2-201ENST00000591258 225 ntBASIC4.08□□□□□ -1.76
LMO4P61968 BNIP3P24-201ENST00000593398 557 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AP001160.4-201ENST00000596971 382 ntBASIC4.08□□□□□ -1.76
LMO4P61968 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
LMO4P61968 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.08□□□□□ -1.76
LMO4P61968 AC069431.2-201ENST00000604149 1099 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AL022394.1-201ENST00000606979 292 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AL049794.2-201ENST00000616301 365 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AC007275.1-201ENST00000621243 671 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AC019206.1-201ENST00000621938 425 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AP000346.3-201ENST00000622821 210 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AP003499.2-201ENST00000624100 483 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AC093775.1-201ENST00000624154 1868 ntBASIC4.08□□□□□ -1.76
LMO4P61968 AC126544.2-201ENST00000625174 749 ntBASIC4.08□□□□□ -1.76
LMO4P61968 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.08□□□□□ -1.76
LMO4P61968 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.08□□□□□ -1.76
LMO4P61968 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.08□□□□□ -1.76
LMO4P61968 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMO4P61968 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.07□□□□□ -1.76
LMO4P61968 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.07□□□□□ -1.76
LMO4P61968 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
LMO4P61968 AP000432.2-201ENST00000624164 2048 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AL450345.1-202ENST00000605741 3881 ntBASIC4.07□□□□□ -1.76
LMO4P61968 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.07□□□□□ -1.76
LMO4P61968 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
LMO4P61968 MTND5P31-201ENST00000419366 1374 ntBASIC4.07□□□□□ -1.76
LMO4P61968 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
LMO4P61968 ZNF652P1-201ENST00000442420 1309 ntBASIC4.07□□□□□ -1.76
LMO4P61968 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 RNU6-792P-201ENST00000363490 107 ntBASIC4.07□□□□□ -1.76
LMO4P61968 RNA5SP505-201ENST00000364748 108 ntBASIC4.07□□□□□ -1.76
LMO4P61968 RNU6-650P-201ENST00000365658 111 ntBASIC4.07□□□□□ -1.76
LMO4P61968 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.07□□□□□ -1.76
LMO4P61968 AL365338.1-201ENST00000422282 858 ntBASIC4.07□□□□□ -1.76
LMO4P61968 RPS27AP6-201ENST00000427962 448 ntBASIC4.07□□□□□ -1.76
LMO4P61968 NRBF2P3-201ENST00000432731 865 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AL512661.1-201ENST00000434586 1253 ntBASIC4.07□□□□□ -1.76
LMO4P61968 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 ELOCP11-201ENST00000436690 332 ntBASIC4.07□□□□□ -1.76
LMO4P61968 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.07□□□□□ -1.76
LMO4P61968 AC007000.2-201ENST00000442564 487 ntBASIC4.07□□□□□ -1.76
LMO4P61968 RPL7AP61-201ENST00000443410 636 ntBASIC4.07□□□□□ -1.76
LMO4P61968 ELOCP16-201ENST00000444494 332 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AL009048.1-201ENST00000450437 298 ntBASIC4.07□□□□□ -1.76
LMO4P61968 Z99714.1-201ENST00000450463 807 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AC010733.1-201ENST00000451515 401 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AL691482.1-201ENST00000453255 87 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AC093166.2-201ENST00000455969 1017 ntBASIC4.07□□□□□ -1.76
LMO4P61968 RPS17P2-201ENST00000461663 408 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AC037198.2-201ENST00000478845 733 ntBASIC4.07□□□□□ -1.76
LMO4P61968 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.07□□□□□ -1.76
LMO4P61968 AC093815.1-201ENST00000508637 280 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AC105313.1-201ENST00000509121 353 ntBASIC4.07□□□□□ -1.76
LMO4P61968 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.07□□□□□ -1.76
LMO4P61968 OR51K1P-201ENST00000510214 950 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.07□□□□□ -1.76
LMO4P61968 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.07□□□□□ -1.76
LMO4P61968 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.07□□□□□ -1.76
LMO4P61968 AP003355.1-201ENST00000518956 587 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.07□□□□□ -1.76
LMO4P61968 OR8G5-201ENST00000524943 1041 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.07□□□□□ -1.76
LMO4P61968 NPM1P35-201ENST00000533043 868 ntBASIC4.07□□□□□ -1.76
LMO4P61968 OR5AN2P-201ENST00000534535 896 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.07□□□□□ -1.76
LMO4P61968 GSTP1P1-201ENST00000548078 319 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.07□□□□□ -1.76
LMO4P61968 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.07□□□□□ -1.76
LMO4P61968 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.07□□□□□ -1.76
LMO4P61968 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.07□□□□□ -1.76
LMO4P61968 AC068790.7-201ENST00000602347 528 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AC018695.5-201ENST00000605872 315 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AC106052.1-201ENST00000608029 497 ntBASIC4.07□□□□□ -1.76
LMO4P61968 AC007497.1-201ENST00000610421 561 ntBASIC4.07□□□□□ -1.76
LMO4P61968 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMO4P61968 U6.48-201ENST00000618523 106 ntBASIC4.07□□□□□ -1.76
LMO4P61968 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.07□□□□□ -1.76
LMO4P61968 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms