Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.12□□□□□ -1.75
CX3CR1P49238 GLRXP2-201ENST00000555594 321 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.12□□□□□ -1.75
CX3CR1P49238 AC090312.1-201ENST00000580637 348 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.12□□□□□ -1.75
CX3CR1P49238 AC026979.4-201ENST00000606555 645 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CR1P49238 AC131238.1-201ENST00000617135 328 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 AC009237.17-201ENST00000618111 748 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 AC009704.2-201ENST00000618739 483 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.12□□□□□ -1.75
CX3CR1P49238 AC005086.4-201ENST00000623065 213 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 RPL23AP61-201ENST00000623642 466 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.12□□□□□ -1.75
CX3CR1P49238 EOGT-210ENST00000615922 1931 ntBASIC4.12□□□□□ -1.75
CX3CR1P49238 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CR1P49238 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.12□□□□□ -1.75
CX3CR1P49238 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.12□□□□□ -1.75
CX3CR1P49238 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CR1P49238 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CR1P49238 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CX3CR1P49238 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.12□□□□□ -1.75
CX3CR1P49238 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.11□□□□□ -1.75
CX3CR1P49238 AC091046.3-201ENST00000631455 1574 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CR1P49238 AL451142.2-201ENST00000429076 2090 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CX3CR1P49238 RNA5SP28-201ENST00000363841 119 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 RNU6-304P-201ENST00000364855 107 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 AC092642.1-201ENST00000392417 425 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 AL589647.1-201ENST00000402485 466 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 OR2AM1P-201ENST00000422137 422 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 EIF4EP1-201ENST00000422311 642 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 OR2B7P-201ENST00000429302 934 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 ARL5AP3-201ENST00000439327 386 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CR1P49238 GEMIN8P3-201ENST00000445417 720 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 AC079168.2-201ENST00000453977 416 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.11□□□□□ -1.75
CX3CR1P49238 RPS5P7-201ENST00000456664 608 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 ZFRP1-201ENST00000457579 2970 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CR1P49238 RPL7AP6-201ENST00000477943 801 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 AC025164.1-201ENST00000496249 478 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CR1P49238 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CR1P49238 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CR1P49238 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CR1P49238 CYCSP28-201ENST00000534284 321 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CR1P49238 EIF1AXP2-201ENST00000555940 413 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CR1P49238 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CR1P49238 AC092868.3-201ENST00000560515 784 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.11□□□□□ -1.75
CX3CR1P49238 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.11□□□□□ -1.75
CX3CR1P49238 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CR1P49238 AC090953.1-201ENST00000604305 1092 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 AC005021.1-201ENST00000608730 355 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.11□□□□□ -1.75
CX3CR1P49238 AC019080.5-201ENST00000624891 757 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CX3CR1P49238 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CR1P49238 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CR1P49238 CIR1P2-201ENST00000514821 1342 ntBASIC4.11□□□□□ -1.75
CX3CR1P49238 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CR1P49238 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.11□□□□□ -1.75
CX3CR1P49238 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CX3CR1P49238 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CR1P49238 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
CX3CR1P49238 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CX3CR1P49238 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CR1P49238 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.1□□□□□ -1.75
CX3CR1P49238 IRF5P1-201ENST00000504852 2164 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CR1P49238 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CR1P49238 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CR1P49238 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CX3CR1P49238 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CR1P49238 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CR1P49238 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CX3CR1P49238 RNU4-23P-201ENST00000362839 140 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 RN7SKP269-201ENST00000365545 319 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CR1P49238 RNU6-532P-201ENST00000384318 107 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CX3CR1P49238 AL607077.1-201ENST00000401718 499 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.1□□□□□ -1.75
CX3CR1P49238 DPPA2P3-201ENST00000411853 655 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 AL591848.1-201ENST00000413092 322 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.1□□□□□ -1.75
CX3CR1P49238 RPL23AP27-201ENST00000415161 451 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.1□□□□□ -1.75
CX3CR1P49238 AC073136.2-201ENST00000417282 849 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 BTF3P9-201ENST00000418784 283 ntBASIC4.1□□□□□ -1.75
CX3CR1P49238 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CX3CR1P49238 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms