Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC245047.2-201ENST00000441060 530 ntBASIC3.2□□□□□ -1.9
CKS2P33552 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC3.2□□□□□ -1.9
CKS2P33552 MTND2P25-201ENST00000449028 610 ntBASIC3.2□□□□□ -1.9
CKS2P33552 FAR2P1-206ENST00000449736 709 ntBASIC3.2□□□□□ -1.9
CKS2P33552 AC108463.1-201ENST00000450258 347 ntBASIC3.2□□□□□ -1.9
CKS2P33552 NDUFA5P5-201ENST00000468361 342 ntBASIC3.2□□□□□ -1.9
CKS2P33552 RPL23AP71-201ENST00000470966 469 ntBASIC3.2□□□□□ -1.9
CKS2P33552 AC006517.1-201ENST00000480485 328 ntBASIC3.2□□□□□ -1.9
CKS2P33552 RPL37P23-201ENST00000492641 294 ntBASIC3.2□□□□□ -1.9
CKS2P33552 RPL36AP41-201ENST00000493820 306 ntBASIC3.2□□□□□ -1.9
CKS2P33552 AC146944.2-203ENST00000502493 354 ntBASIC3.2□□□□□ -1.9
CKS2P33552 AC083829.1-201ENST00000503756 657 ntBASIC3.2□□□□□ -1.9
CKS2P33552 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CKS2P33552 AC139495.1-202ENST00000513164 354 ntBASIC3.2□□□□□ -1.9
CKS2P33552 AC004980.4-201ENST00000513375 203 ntBASIC3.2□□□□□ -1.9
CKS2P33552 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.2□□□□□ -1.9
CKS2P33552 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.2□□□□□ -1.9
CKS2P33552 VTA1P2-201ENST00000520205 911 ntBASIC3.2□□□□□ -1.9
CKS2P33552 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.2□□□□□ -1.9
CKS2P33552 AC090281.1-201ENST00000523019 276 ntBASIC3.2□□□□□ -1.9
CKS2P33552 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.2□□□□□ -1.9
CKS2P33552 MORF4L1P3-201ENST00000525966 950 ntBASIC3.2□□□□□ -1.9
CKS2P33552 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.2□□□□□ -1.9
CKS2P33552 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.2□□□□□ -1.9
CKS2P33552 AC126175.1-201ENST00000617041 758 ntBASIC3.2□□□□□ -1.9
CKS2P33552 AL357153.4-201ENST00000620487 1016 ntBASIC3.2□□□□□ -1.9
CKS2P33552 LINC01808-202ENST00000641680 1116 ntBASIC3.2□□□□□ -1.9
CKS2P33552 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.2□□□□□ -1.9
CKS2P33552 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CKS2P33552 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CKS2P33552 AC083899.2-201ENST00000423285 1376 ntBASIC3.2□□□□□ -1.9
CKS2P33552 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CKS2P33552 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.2□□□□□ -1.9
CKS2P33552 SAMMSON-226ENST00000642089 1582 ntBASIC3.2□□□□□ -1.9
CKS2P33552 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CKS2P33552 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CKS2P33552 MFSD8-242ENST00000641690 4199 ntBASIC3.19□□□□□ -1.9
CKS2P33552 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CKS2P33552 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CKS2P33552 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS2P33552 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CKS2P33552 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.19□□□□□ -1.9
CKS2P33552 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.19□□□□□ -1.9
CKS2P33552 VN1R12P-201ENST00000403778 876 ntBASIC3.19□□□□□ -1.9
CKS2P33552 NCSTNP1-201ENST00000406229 144 ntBASIC3.19□□□□□ -1.9
CKS2P33552 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CKS2P33552 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS2P33552 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS2P33552 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS2P33552 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS2P33552 AC234779.1-201ENST00000425910 285 ntBASIC3.19□□□□□ -1.9
CKS2P33552 OR2B7P-201ENST00000429302 934 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS2P33552 HMGB3P10-201ENST00000434734 572 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS2P33552 AC112498.1-201ENST00000444401 332 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS2P33552 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS2P33552 AC243772.1-201ENST00000451620 410 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.19□□□□□ -1.9
CKS2P33552 RN7SL168P-201ENST00000463821 279 ntBASIC3.19□□□□□ -1.9
CKS2P33552 RPSAP39-201ENST00000467439 883 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC024558.1-201ENST00000505008 528 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC025554.1-201ENST00000505641 188 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC090819.1-201ENST00000523800 1111 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC135001.1-201ENST00000544546 283 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS2P33552 AC107016.1-201ENST00000550463 337 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC004825.1-201ENST00000555068 586 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC090515.3-201ENST00000560431 315 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC3.19□□□□□ -1.9
CKS2P33552 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.19□□□□□ -1.9
CKS2P33552 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC3.19□□□□□ -1.9
CKS2P33552 AC008521.2-201ENST00000591021 259 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC020914.4-201ENST00000597690 277 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS2P33552 AC005034.4-201ENST00000603612 899 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AL512329.2-201ENST00000607350 548 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC008115.4-201ENST00000619780 775 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AL359715.5-201ENST00000623431 443 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC138907.10-201ENST00000623708 983 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC008785.1-201ENST00000624475 456 ntBASIC3.19□□□□□ -1.9
CKS2P33552 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS2P33552 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.19□□□□□ -1.9
CKS2P33552 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CKS2P33552 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CKS2P33552 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CKS2P33552 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CKS2P33552 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.19□□□□□ -1.9
CKS2P33552 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS2P33552 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CKS2P33552 CPHL1P-201ENST00000461341 3407 ntBASIC3.19□□□□□ -1.9
CKS2P33552 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.19□□□□□ -1.9
CKS2P33552 ZNF137P-201ENST00000456718 1920 ntBASIC3.19□□□□□ -1.9
CKS2P33552 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CKS2P33552 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CKS2P33552 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CKS2P33552 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CKS2P33552 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CKS2P33552 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms