Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 NDUFAF4P3-201ENST00000456468 525 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 RPS29P15-201ENST00000458329 171 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 RN7SL233P-201ENST00000469988 277 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC7.62□□□□□ -1.19
COL9A1P20849 AC022415.1-202ENST00000486612 523 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 RFPL4AP3-201ENST00000515267 345 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 AC022616.4-201ENST00000522985 181 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.62□□□□□ -1.19
COL9A1P20849 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC7.62□□□□□ -1.19
COL9A1P20849 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC7.62□□□□□ -1.19
COL9A1P20849 CYP4A44P-201ENST00000569984 154 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC7.62□□□□□ -1.19
COL9A1P20849 AP005119.1-201ENST00000580956 292 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC7.62□□□□□ -1.19
COL9A1P20849 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.62□□□□□ -1.19
COL9A1P20849 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.62□□□□□ -1.19
COL9A1P20849 AC012368.3-201ENST00000604190 219 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 AL354984.3-201ENST00000604803 325 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 U47924.1-201ENST00000606539 434 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 FTX_2.1-201ENST00000618816 94 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 RN7SL680P-201ENST00000620379 299 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
COL9A1P20849 U6.104-201ENST00000637979 90 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 AC132825.6-201ENST00000638861 357 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL9A1P20849 MAPK10-343ENST00000641677 2546 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC7.62□□□□□ -1.19
COL9A1P20849 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.62□□□□□ -1.19
COL9A1P20849 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
COL9A1P20849 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC7.62□□□□□ -1.19
COL9A1P20849 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC7.62□□□□□ -1.19
COL9A1P20849 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL9A1P20849 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL9A1P20849 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL9A1P20849 AC233263.6-201ENST00000631132 1963 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
COL9A1P20849 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL9A1P20849 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.62□□□□□ -1.19
COL9A1P20849 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
COL9A1P20849 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC7.62□□□□□ -1.19
COL9A1P20849 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
COL9A1P20849 TRIM60P19-201ENST00000452879 1462 ntBASIC7.62□□□□□ -1.19
COL9A1P20849 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC7.62□□□□□ -1.19
COL9A1P20849 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.61□□□□□ -1.19
COL9A1P20849 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
COL9A1P20849 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
COL9A1P20849 AL161891.1-201ENST00000621575 4636 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.61□□□□□ -1.19
COL9A1P20849 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.61□□□□□ -1.19
COL9A1P20849 AC119674.1-204ENST00000641348 1343 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC7.61□□□□□ -1.19
COL9A1P20849 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
COL9A1P20849 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC7.61□□□□□ -1.19
COL9A1P20849 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC7.61□□□□□ -1.19
COL9A1P20849 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 RNU6-450P-201ENST00000364654 107 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 RNA5SP279-201ENST00000365513 117 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
COL9A1P20849 MIR1302-6-201ENST00000408466 90 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 AL355862.1-201ENST00000412705 353 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.61□□□□□ -1.19
COL9A1P20849 AL590135.1-201ENST00000422215 156 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.61□□□□□ -1.19
COL9A1P20849 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC7.61□□□□□ -1.19
COL9A1P20849 AL359672.1-201ENST00000442302 409 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.61□□□□□ -1.19
COL9A1P20849 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC7.61□□□□□ -1.19
COL9A1P20849 Z83838.1-202ENST00000456225 839 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 SNRPFP3-201ENST00000457792 225 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 AL049714.1-201ENST00000466686 347 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 RPL23AP12-201ENST00000467573 473 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 RPL7P6-201ENST00000480903 738 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 AC092436.1-201ENST00000506450 503 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.61□□□□□ -1.19
COL9A1P20849 RNU6-470P-201ENST00000515954 104 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 AC131281.1-201ENST00000522984 164 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.61□□□□□ -1.19
COL9A1P20849 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.61□□□□□ -1.19
COL9A1P20849 CUX2P1-201ENST00000606426 298 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC7.61□□□□□ -1.19
COL9A1P20849 MIR6721-201ENST00000617181 87 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 AL356585.10-201ENST00000641883 123 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 AL732372.2-225ENST00000642124 456 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
COL9A1P20849 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms