Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC124947.2-202ENST00000552735 133 ntBASIC5.76□□□□□ -1.49
ATF4P18848 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC5.76□□□□□ -1.49
ATF4P18848 MTCO3P24-201ENST00000572729 782 ntBASIC5.76□□□□□ -1.49
ATF4P18848 MIR3137-201ENST00000577367 75 ntBASIC5.76□□□□□ -1.49
ATF4P18848 AC090615.1-201ENST00000577519 154 ntBASIC5.76□□□□□ -1.49
ATF4P18848 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC5.76□□□□□ -1.49
ATF4P18848 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.76□□□□□ -1.49
ATF4P18848 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.76□□□□□ -1.49
ATF4P18848 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.76□□□□□ -1.49
ATF4P18848 AL109918.2-201ENST00000605188 279 ntBASIC5.76□□□□□ -1.49
ATF4P18848 RNU6-87P-201ENST00000607561 108 ntBASIC5.76□□□□□ -1.49
ATF4P18848 AF250324.2-201ENST00000608299 610 ntBASIC5.76□□□□□ -1.49
ATF4P18848 U6.42-201ENST00000618440 107 ntBASIC5.76□□□□□ -1.49
ATF4P18848 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
ATF4P18848 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ATF4P18848 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
ATF4P18848 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ATF4P18848 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.75□□□□□ -1.49
ATF4P18848 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
ATF4P18848 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATF4P18848 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.75□□□□□ -1.49
ATF4P18848 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
ATF4P18848 AL450326.2-201ENST00000421913 1962 ntBASIC5.75□□□□□ -1.49
ATF4P18848 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.75□□□□□ -1.49
ATF4P18848 MFSD8-256ENST00000641949 1640 ntBASIC5.75□□□□□ -1.49
ATF4P18848 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATF4P18848 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.75□□□□□ -1.49
ATF4P18848 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATF4P18848 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
ATF4P18848 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATF4P18848 RNA5SP389-201ENST00000362610 115 ntBASIC5.75□□□□□ -1.49
ATF4P18848 RNA5SP226-201ENST00000362653 115 ntBASIC5.75□□□□□ -1.49
ATF4P18848 RNA5SP161-201ENST00000363871 115 ntBASIC5.75□□□□□ -1.49
ATF4P18848 PHBP1-201ENST00000392260 808 ntBASIC5.75□□□□□ -1.49
ATF4P18848 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.75□□□□□ -1.49
ATF4P18848 SNRPEP6-201ENST00000407465 277 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AL121878.1-201ENST00000418638 859 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC5.75□□□□□ -1.49
ATF4P18848 MED15P9-201ENST00000424716 533 ntBASIC5.75□□□□□ -1.49
ATF4P18848 USP9YP18-201ENST00000425912 695 ntBASIC5.75□□□□□ -1.49
ATF4P18848 PSMA6P3-201ENST00000428242 164 ntBASIC5.75□□□□□ -1.49
ATF4P18848 NPM1P18-201ENST00000434232 732 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AC009961.2-201ENST00000435771 251 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.75□□□□□ -1.49
ATF4P18848 AL450263.2-201ENST00000439400 589 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AL353572.1-201ENST00000442490 417 ntBASIC5.75□□□□□ -1.49
ATF4P18848 RPL17P49-201ENST00000443728 411 ntBASIC5.75□□□□□ -1.49
ATF4P18848 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.75□□□□□ -1.49
ATF4P18848 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC5.75□□□□□ -1.49
ATF4P18848 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.75□□□□□ -1.49
ATF4P18848 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.75□□□□□ -1.49
ATF4P18848 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATF4P18848 snoU13.8-201ENST00000458890 104 ntBASIC5.75□□□□□ -1.49
ATF4P18848 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.75□□□□□ -1.49
ATF4P18848 RN7SL815P-201ENST00000470970 290 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.75□□□□□ -1.49
ATF4P18848 MTND1P3-201ENST00000484956 952 ntBASIC5.75□□□□□ -1.49
ATF4P18848 RN7SL869P-201ENST00000497032 300 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC5.75□□□□□ -1.49
ATF4P18848 AL445187.1-201ENST00000502685 260 ntBASIC5.75□□□□□ -1.49
ATF4P18848 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.75□□□□□ -1.49
ATF4P18848 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.75□□□□□ -1.49
ATF4P18848 AC016065.2-201ENST00000514530 444 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.75□□□□□ -1.49
ATF4P18848 WBP1LP3-201ENST00000523033 208 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.75□□□□□ -1.49
ATF4P18848 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.75□□□□□ -1.49
ATF4P18848 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC5.75□□□□□ -1.49
ATF4P18848 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.75□□□□□ -1.49
ATF4P18848 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.75□□□□□ -1.49
ATF4P18848 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC5.75□□□□□ -1.49
ATF4P18848 AC034268.2-201ENST00000571784 482 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.75□□□□□ -1.49
ATF4P18848 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.75□□□□□ -1.49
ATF4P18848 MIR3159-201ENST00000584572 74 ntBASIC5.75□□□□□ -1.49
ATF4P18848 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.75□□□□□ -1.49
ATF4P18848 AL137190.1-201ENST00000603288 282 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AL009028.1-201ENST00000604895 802 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATF4P18848 AL136985.2-201ENST00000607372 535 ntBASIC5.75□□□□□ -1.49
ATF4P18848 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.75□□□□□ -1.49
ATF4P18848 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.75□□□□□ -1.49
ATF4P18848 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC5.75□□□□□ -1.49
ATF4P18848 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.75□□□□□ -1.49
ATF4P18848 AC124864.2-201ENST00000624736 186 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AC073488.8-201ENST00000631952 757 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AC010149.2-201ENST00000637608 315 ntBASIC5.75□□□□□ -1.49
ATF4P18848 AL354702.2-202ENST00000641481 890 ntBASIC5.75□□□□□ -1.49
ATF4P18848 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATF4P18848 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.75□□□□□ -1.49
ATF4P18848 AC025470.1-201ENST00000510053 2032 ntBASIC5.75□□□□□ -1.49
ATF4P18848 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
ATF4P18848 AL353796.1-201ENST00000561542 3241 ntBASIC5.75□□□□□ -1.49
ATF4P18848 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.75□□□□□ -1.49
ATF4P18848 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
ATF4P18848 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATF4P18848 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ATF4P18848 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATF4P18848 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
ATF4P18848 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms