Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LINC00557-201ENST00000563184 1279 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 MIR4472-2-201ENST00000582069 67 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 AC119501.1-201ENST00000603646 475 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 AC015849.2-201ENST00000605738 409 ntBASIC5.06□□□□□ -1.6
PDGFRAP16234 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
PDGFRAP16234 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.06□□□□□ -1.6
PDGFRAP16234 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.06□□□□□ -1.6
PDGFRAP16234 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFRAP16234 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFRAP16234 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.06□□□□□ -1.6
PDGFRAP16234 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFRAP16234 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDGFRAP16234 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PDGFRAP16234 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFRAP16234 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
PDGFRAP16234 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFRAP16234 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFRAP16234 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
PDGFRAP16234 AL034370.1-201ENST00000397254 1590 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 SAMMSON-226ENST00000642089 1582 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFRAP16234 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFRAP16234 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFRAP16234 AC019155.1-201ENST00000382242 574 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 AL035419.1-201ENST00000397037 564 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.05□□□□□ -1.6
PDGFRAP16234 NPM1P40-201ENST00000412758 733 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.05□□□□□ -1.6
PDGFRAP16234 AC073136.2-201ENST00000417282 849 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 E2F6P2-201ENST00000420708 748 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.05□□□□□ -1.6
PDGFRAP16234 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.05□□□□□ -1.6
PDGFRAP16234 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.05□□□□□ -1.6
PDGFRAP16234 AC063943.1-201ENST00000465434 453 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 AC092324.1-201ENST00000468671 324 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.05□□□□□ -1.6
PDGFRAP16234 COL6A4P2-205ENST00000509855 506 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 SETP12-201ENST00000514068 805 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.05□□□□□ -1.6
PDGFRAP16234 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.05□□□□□ -1.6
PDGFRAP16234 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.05□□□□□ -1.6
PDGFRAP16234 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.05□□□□□ -1.6
PDGFRAP16234 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PDGFRAP16234 AC027176.2-201ENST00000559166 746 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.05□□□□□ -1.6
PDGFRAP16234 AL162574.2-201ENST00000614618 657 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.05□□□□□ -1.6
PDGFRAP16234 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFRAP16234 TLK1P1-201ENST00000456760 2440 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.05□□□□□ -1.6
PDGFRAP16234 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
PDGFRAP16234 CASC19-206ENST00000641028 1430 ntBASIC5.05□□□□□ -1.6
PDGFRAP16234 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDGFRAP16234 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.05□□□□□ -1.6
PDGFRAP16234 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFRAP16234 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PDGFRAP16234 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.04□□□□□ -1.6
PDGFRAP16234 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFRAP16234 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PDGFRAP16234 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFRAP16234 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFRAP16234 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFRAP16234 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PDGFRAP16234 RNA5SP191-201ENST00000362585 102 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFRAP16234 RNU6-225P-201ENST00000384613 103 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDGFRAP16234 AC114755.2-201ENST00000413520 361 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 LINC00993-201ENST00000420453 540 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 CKS1BP6-201ENST00000424932 240 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFRAP16234 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFRAP16234 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFRAP16234 AL049745.1-201ENST00000433953 286 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 AC004938.1-201ENST00000438468 308 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFRAP16234 RHEBP2-201ENST00000450289 600 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 RPS6P2-201ENST00000454208 705 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFRAP16234 IGLV2-34-201ENST00000490007 283 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.04□□□□□ -1.6
PDGFRAP16234 HIGD1AP18-201ENST00000520730 278 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.04□□□□□ -1.6
PDGFRAP16234 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFRAP16234 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFRAP16234 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.04□□□□□ -1.6
PDGFRAP16234 BGLT3-201ENST00000564523 994 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 AC093249.4-201ENST00000564755 259 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.04□□□□□ -1.6
PDGFRAP16234 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.04□□□□□ -1.6
PDGFRAP16234 SS18L2P2-201ENST00000583960 235 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 AC022726.1-201ENST00000587475 207 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFRAP16234 AC131238.1-201ENST00000617135 328 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFRAP16234 AC073592.7-201ENST00000623659 507 ntBASIC5.04□□□□□ -1.6
PDGFRAP16234 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.04□□□□□ -1.6
PDGFRAP16234 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.04□□□□□ -1.6
PDGFRAP16234 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms