Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.12□□□□□ -1.75
SPTA1P02549 AC023762.1-201ENST00000603280 584 ntBASIC4.12□□□□□ -1.75
SPTA1P02549 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.12□□□□□ -1.75
SPTA1P02549 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SPTA1P02549 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SPTA1P02549 AC011447.7-201ENST00000624228 1590 ntBASIC4.12□□□□□ -1.75
SPTA1P02549 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.12□□□□□ -1.75
SPTA1P02549 AL929601.4-201ENST00000613011 1341 ntBASIC4.12□□□□□ -1.75
SPTA1P02549 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SPTA1P02549 AL451142.1-201ENST00000375867 775 ntBASIC4.12□□□□□ -1.75
SPTA1P02549 AC140479.3-201ENST00000418944 1126 ntBASIC4.12□□□□□ -1.75
SPTA1P02549 AL390879.2-203ENST00000426943 1121 ntBASIC4.12□□□□□ -1.75
SPTA1P02549 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.12□□□□□ -1.75
SPTA1P02549 AC073052.1-201ENST00000440417 714 ntBASIC4.12□□□□□ -1.75
SPTA1P02549 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.12□□□□□ -1.75
SPTA1P02549 AL159169.3-201ENST00000608871 561 ntBASIC4.12□□□□□ -1.75
SPTA1P02549 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC4.12□□□□□ -1.75
SPTA1P02549 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.12□□□□□ -1.75
SPTA1P02549 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SPTA1P02549 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SPTA1P02549 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SPTA1P02549 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SPTA1P02549 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SPTA1P02549 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SPTA1P02549 ZNF833P-201ENST00000424938 1494 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SPTA1P02549 BTF3P10-201ENST00000433415 495 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 AC104651.2-201ENST00000447549 528 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 RPS29P2-201ENST00000479278 136 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.11□□□□□ -1.75
SPTA1P02549 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.11□□□□□ -1.75
SPTA1P02549 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.11□□□□□ -1.75
SPTA1P02549 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.11□□□□□ -1.75
SPTA1P02549 MTCYBP13-201ENST00000578634 1093 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 MIR7853-201ENST00000584820 132 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.11□□□□□ -1.75
SPTA1P02549 AL121772.2-201ENST00000614331 297 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 AC112484.5-201ENST00000624189 228 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SPTA1P02549 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.11□□□□□ -1.75
SPTA1P02549 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.11□□□□□ -1.75
SPTA1P02549 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SPTA1P02549 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SPTA1P02549 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SPTA1P02549 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SPTA1P02549 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SPTA1P02549 RPL21P17-201ENST00000397467 475 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 TMSB10P2-201ENST00000416049 131 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 COX6CP13-201ENST00000428703 226 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SPTA1P02549 EIF2S2P5-201ENST00000457635 968 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 AL592156.1-201ENST00000508758 304 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 RN7SKP157-201ENST00000516174 282 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 RNA5SP49-201ENST00000516450 115 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.11□□□□□ -1.75
SPTA1P02549 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.11□□□□□ -1.75
SPTA1P02549 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.11□□□□□ -1.75
SPTA1P02549 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.11□□□□□ -1.75
SPTA1P02549 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.11□□□□□ -1.75
SPTA1P02549 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SPTA1P02549 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.11□□□□□ -1.75
SPTA1P02549 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SPTA1P02549 AC004944.1-201ENST00000517807 3059 ntBASIC4.11□□□□□ -1.75
SPTA1P02549 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.1□□□□□ -1.75
SPTA1P02549 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.1□□□□□ -1.75
SPTA1P02549 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SPTA1P02549 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SPTA1P02549 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SPTA1P02549 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.1□□□□□ -1.75
SPTA1P02549 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SPTA1P02549 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.1□□□□□ -1.75
SPTA1P02549 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.1□□□□□ -1.75
SPTA1P02549 RPS27AP11-201ENST00000402798 447 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 VN1R51P-201ENST00000411675 945 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 AL139095.3-201ENST00000419672 1203 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 YY1P1-201ENST00000427625 668 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.1□□□□□ -1.75
SPTA1P02549 AC110768.1-201ENST00000509222 400 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.1□□□□□ -1.75
SPTA1P02549 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.1□□□□□ -1.75
SPTA1P02549 AC090136.1-201ENST00000520009 240 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.1□□□□□ -1.75
SPTA1P02549 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.1□□□□□ -1.75
SPTA1P02549 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.1□□□□□ -1.75
SPTA1P02549 RN7SL290P-201ENST00000578661 300 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 AC010487.1-201ENST00000594408 1172 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 MIMT1-201ENST00000597105 1050 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 BPIFA4P-203ENST00000603168 689 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.1□□□□□ -1.75
SPTA1P02549 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.1□□□□□ -1.75
SPTA1P02549 AL391684.1-202ENST00000641293 1636 ntBASIC4.1□□□□□ -1.75
SPTA1P02549 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.1□□□□□ -1.75
SPTA1P02549 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SPTA1P02549 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SPTA1P02549 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SPTA1P02549 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SPTA1P02549 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.1□□□□□ -1.75
SPTA1P02549 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SPTA1P02549 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC4.1□□□□□ -1.75
SPTA1P02549 RNA5SP283-201ENST00000365604 119 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms