Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.29□□□□□ -1.56
COL1A1P02452 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.29□□□□□ -1.56
COL1A1P02452 AL161729.3-201ENST00000603533 673 ntBASIC5.29□□□□□ -1.56
COL1A1P02452 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL1A1P02452 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL1A1P02452 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL1A1P02452 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.29□□□□□ -1.56
COL1A1P02452 AC022106.2-201ENST00000620114 757 ntBASIC5.29□□□□□ -1.56
COL1A1P02452 AC104260.2-201ENST00000623551 3497 ntBASIC5.29□□□□□ -1.56
COL1A1P02452 AC005005.4-201ENST00000623789 16698 ntBASIC5.29□□□□□ -1.56
COL1A1P02452 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
COL1A1P02452 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL1A1P02452 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL1A1P02452 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL1A1P02452 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL1A1P02452 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL1A1P02452 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL1A1P02452 A2MP1-204ENST00000566278 4130 ntBASIC5.28□□□□□ -1.56
COL1A1P02452 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL1A1P02452 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
COL1A1P02452 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.28□□□□□ -1.56
COL1A1P02452 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.28□□□□□ -1.56
COL1A1P02452 CYP1D1P-201ENST00000416662 1433 ntBASIC5.28□□□□□ -1.56
COL1A1P02452 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL1A1P02452 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL1A1P02452 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.28□□□□□ -1.56
COL1A1P02452 AL356095.1-201ENST00000417217 199 ntBASIC5.28□□□□□ -1.56
COL1A1P02452 AL157831.1-201ENST00000426134 473 ntBASIC5.28□□□□□ -1.56
COL1A1P02452 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.28□□□□□ -1.56
COL1A1P02452 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.28□□□□□ -1.56
COL1A1P02452 RRM2P4-201ENST00000441721 562 ntBASIC5.28□□□□□ -1.56
COL1A1P02452 AL031584.1-201ENST00000447169 754 ntBASIC5.28□□□□□ -1.56
COL1A1P02452 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.28□□□□□ -1.56
COL1A1P02452 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.28□□□□□ -1.56
COL1A1P02452 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.28□□□□□ -1.56
COL1A1P02452 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
COL1A1P02452 RNA5SP519-201ENST00000516480 119 ntBASIC5.28□□□□□ -1.56
COL1A1P02452 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL1A1P02452 AC010547.7-201ENST00000570323 333 ntBASIC5.28□□□□□ -1.56
COL1A1P02452 RN7SL600P-201ENST00000581811 299 ntBASIC5.28□□□□□ -1.56
COL1A1P02452 Z98200.1-201ENST00000607298 470 ntBASIC5.28□□□□□ -1.56
COL1A1P02452 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.28□□□□□ -1.56
COL1A1P02452 AC006133.1-201ENST00000617106 264 ntBASIC5.28□□□□□ -1.56
COL1A1P02452 AC007546.2-201ENST00000623996 360 ntBASIC5.28□□□□□ -1.56
COL1A1P02452 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.28□□□□□ -1.56
COL1A1P02452 AC008013.2-202ENST00000637965 364 ntBASIC5.28□□□□□ -1.56
COL1A1P02452 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.28□□□□□ -1.56
COL1A1P02452 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.28□□□□□ -1.56
COL1A1P02452 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
COL1A1P02452 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL1A1P02452 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL1A1P02452 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL1A1P02452 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL1A1P02452 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
COL1A1P02452 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.28□□□□□ -1.56
COL1A1P02452 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.28□□□□□ -1.56
COL1A1P02452 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL1A1P02452 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL1A1P02452 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL1A1P02452 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.27□□□□□ -1.57
COL1A1P02452 CEACAMP8-201ENST00000413902 580 ntBASIC5.27□□□□□ -1.57
COL1A1P02452 RPL21P89-201ENST00000444021 467 ntBASIC5.27□□□□□ -1.57
COL1A1P02452 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL1A1P02452 PARP4P3-201ENST00000510265 317 ntBASIC5.27□□□□□ -1.57
COL1A1P02452 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.27□□□□□ -1.57
COL1A1P02452 RNA5SP49-201ENST00000516450 115 ntBASIC5.27□□□□□ -1.57
COL1A1P02452 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.27□□□□□ -1.57
COL1A1P02452 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.27□□□□□ -1.57
COL1A1P02452 RPL23AP97-201ENST00000568955 471 ntBASIC5.27□□□□□ -1.57
COL1A1P02452 MIR4286-201ENST00000580651 93 ntBASIC5.27□□□□□ -1.57
COL1A1P02452 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.27□□□□□ -1.57
COL1A1P02452 AC006116.5-201ENST00000591936 559 ntBASIC5.27□□□□□ -1.57
COL1A1P02452 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.27□□□□□ -1.57
COL1A1P02452 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.27□□□□□ -1.57
COL1A1P02452 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.27□□□□□ -1.57
COL1A1P02452 AC067931.1-201ENST00000624190 671 ntBASIC5.27□□□□□ -1.57
COL1A1P02452 FP325313.1-201ENST00000638228 703 ntBASIC5.27□□□□□ -1.57
COL1A1P02452 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
COL1A1P02452 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.27□□□□□ -1.57
COL1A1P02452 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL1A1P02452 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
COL1A1P02452 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL1A1P02452 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL1A1P02452 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.27□□□□□ -1.57
COL1A1P02452 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL1A1P02452 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.27□□□□□ -1.57
COL1A1P02452 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
COL1A1P02452 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL1A1P02452 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL1A1P02452 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
COL1A1P02452 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL1A1P02452 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL1A1P02452 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL1A1P02452 DDX39BP2-208ENST00000453923 258 ntBASIC5.26□□□□□ -1.57
COL1A1P02452 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.26□□□□□ -1.57
COL1A1P02452 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
COL1A1P02452 NDUFB4P12-201ENST00000513465 390 ntBASIC5.26□□□□□ -1.57
COL1A1P02452 AC109635.6-201ENST00000525487 1113 ntBASIC5.26□□□□□ -1.57
COL1A1P02452 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.26□□□□□ -1.57
COL1A1P02452 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms