Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX3O60493 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.64□□□□□ -1.67
SNX3O60493 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX3O60493 AC120053.1-201ENST00000607706 736 ntBASIC4.64□□□□□ -1.67
SNX3O60493 AC110792.4-201ENST00000609843 298 ntBASIC4.64□□□□□ -1.67
SNX3O60493 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.64□□□□□ -1.67
SNX3O60493 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX3O60493 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.64□□□□□ -1.67
SNX3O60493 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.64□□□□□ -1.67
SNX3O60493 AC011815.3-201ENST00000624194 473 ntBASIC4.64□□□□□ -1.67
SNX3O60493 AC073593.1-201ENST00000624500 411 ntBASIC4.64□□□□□ -1.67
SNX3O60493 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNX3O60493 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SNX3O60493 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX3O60493 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNX3O60493 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNX3O60493 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SNX3O60493 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNX3O60493 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX3O60493 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX3O60493 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
SNX3O60493 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SNX3O60493 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX3O60493 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SNX3O60493 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.63□□□□□ -1.67
SNX3O60493 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX3O60493 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SNX3O60493 RNA5SP132-201ENST00000364725 118 ntBASIC4.63□□□□□ -1.67
SNX3O60493 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.63□□□□□ -1.67
SNX3O60493 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SNX3O60493 RNU6-796P-201ENST00000391086 107 ntBASIC4.63□□□□□ -1.67
SNX3O60493 AL590762.2-201ENST00000395798 571 ntBASIC4.63□□□□□ -1.67
SNX3O60493 HMGB1P10-201ENST00000395823 563 ntBASIC4.63□□□□□ -1.67
SNX3O60493 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.63□□□□□ -1.67
SNX3O60493 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.63□□□□□ -1.67
SNX3O60493 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.63□□□□□ -1.67
SNX3O60493 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX3O60493 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SNX3O60493 OR52E7P-201ENST00000452394 933 ntBASIC4.63□□□□□ -1.67
SNX3O60493 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.63□□□□□ -1.67
SNX3O60493 AC009127.1-201ENST00000467090 155 ntBASIC4.63□□□□□ -1.67
SNX3O60493 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.63□□□□□ -1.67
SNX3O60493 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.63□□□□□ -1.67
SNX3O60493 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.63□□□□□ -1.67
SNX3O60493 AC006499.6-201ENST00000511169 607 ntBASIC4.63□□□□□ -1.67
SNX3O60493 RNA5SP43-201ENST00000516559 110 ntBASIC4.63□□□□□ -1.67
SNX3O60493 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.63□□□□□ -1.67
SNX3O60493 CIR1P1-201ENST00000524055 1133 ntBASIC4.63□□□□□ -1.67
SNX3O60493 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SNX3O60493 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SNX3O60493 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.63□□□□□ -1.67
SNX3O60493 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.63□□□□□ -1.67
SNX3O60493 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SNX3O60493 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.63□□□□□ -1.67
SNX3O60493 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.63□□□□□ -1.67
SNX3O60493 AC091178.1-203ENST00000584586 279 ntBASIC4.63□□□□□ -1.67
SNX3O60493 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.63□□□□□ -1.67
SNX3O60493 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SNX3O60493 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.63□□□□□ -1.67
SNX3O60493 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SNX3O60493 AC006840.1-201ENST00000623069 542 ntBASIC4.63□□□□□ -1.67
SNX3O60493 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.63□□□□□ -1.67
SNX3O60493 SAMMSON-209ENST00000641222 1100 ntBASIC4.63□□□□□ -1.67
SNX3O60493 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SNX3O60493 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX3O60493 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SNX3O60493 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX3O60493 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
SNX3O60493 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
SNX3O60493 AC087190.4-201ENST00000574616 8334 ntBASIC4.63□□□□□ -1.67
SNX3O60493 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX3O60493 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.63□□□□□ -1.67
SNX3O60493 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SNX3O60493 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX3O60493 AL592494.2-201ENST00000425455 1548 ntBASIC4.62□□□□□ -1.67
SNX3O60493 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX3O60493 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SNX3O60493 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX3O60493 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SNX3O60493 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX3O60493 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.62□□□□□ -1.67
SNX3O60493 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
SNX3O60493 CCT8P1-201ENST00000413611 1657 ntBASIC4.62□□□□□ -1.67
SNX3O60493 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SNX3O60493 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX3O60493 SNORD74.4-201ENST00000364129 80 ntBASIC4.62□□□□□ -1.67
SNX3O60493 RN7SKP124-201ENST00000364730 341 ntBASIC4.62□□□□□ -1.67
SNX3O60493 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.62□□□□□ -1.67
SNX3O60493 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SNX3O60493 RNU6-1005P-201ENST00000384519 107 ntBASIC4.62□□□□□ -1.67
SNX3O60493 MIR513A2-201ENST00000385249 127 ntBASIC4.62□□□□□ -1.67
SNX3O60493 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX3O60493 AL158050.1-201ENST00000416077 457 ntBASIC4.62□□□□□ -1.67
SNX3O60493 AC004552.1-201ENST00000419089 348 ntBASIC4.62□□□□□ -1.67
SNX3O60493 LINC00993-201ENST00000420453 540 ntBASIC4.62□□□□□ -1.67
SNX3O60493 AL645608.4-201ENST00000423619 154 ntBASIC4.62□□□□□ -1.67
SNX3O60493 VN1R42P-201ENST00000424651 344 ntBASIC4.62□□□□□ -1.67
SNX3O60493 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.62□□□□□ -1.67
SNX3O60493 HLA-N-201ENST00000437516 135 ntBASIC4.62□□□□□ -1.67
SNX3O60493 AL161636.2-201ENST00000445179 927 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms