Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 AL450489.1-201ENST00000612071 468 ntBASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 AL353726.1-201ENST00000614041 1000 ntBASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 MIR7155-201ENST00000615925 56 ntBASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 AC037198.3-201ENST00000616754 526 ntBASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 AC022509.4-201ENST00000621404 572 ntBASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 SAMMSON-227ENST00000642114 1199 ntBASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
PCDHB1Q9Y5F3 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 MRE11P1-201ENST00000464884 2127 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC007342.5-201ENST00000571340 2142 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC046144.1-201ENST00000478559 1853 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 TTC39DP-201ENST00000416781 1688 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 CASC19-248ENST00000641674 1356 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC096921.1-201ENST00000411661 375 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AL354868.1-201ENST00000417077 482 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 GAPDHP49-201ENST00000421421 961 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 MTCO1P3-201ENST00000429327 192 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 HMGB1P45-201ENST00000435986 653 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 OR2AO1P-201ENST00000476497 403 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 RPS23P1-201ENST00000491662 432 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 RPF2P2-201ENST00000504693 896 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 OR10G5P-201ENST00000532733 358 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AL356057.1-201ENST00000533798 831 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AP002373.2-201ENST00000541631 1060 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 NIFKP8-201ENST00000560500 874 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC002400.1-201ENST00000569310 726 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC024940.4-201ENST00000605507 246 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC005840.5-201ENST00000619166 599 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC139792.2-201ENST00000624218 587 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC068620.4-201ENST00000636730 1182 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 CASC19-222ENST00000641321 1173 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 LINC02019-201ENST00000608605 2060 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 AC007842.1-201ENST00000597336 2039 ntBASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDHB1Q9Y5F3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AL355834.1-201ENST00000556602 3965 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC114786.1-201ENST00000512892 1415 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 RNU6-560P-201ENST00000364007 108 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 MIR1303-201ENST00000408625 86 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 RNU4-72P-201ENST00000410754 173 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 RPS6P23-201ENST00000413224 722 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC006960.1-201ENST00000419980 153 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 RPL7P53-201ENST00000421245 739 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 RPS24P8-201ENST00000431490 402 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC073143.1-201ENST00000436316 395 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 GTF2IP7-202ENST00000436677 309 ntBASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.59□□□□□ -1.51
PCDHB1Q9Y5F3 RPS23P9-201ENST00000448848 438 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms