Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RPL12P11-201ENST00000439970 501 ntBASIC4.27□□□□□ -1.73
VAPAQ9P0L0 AC022431.1-201ENST00000450941 438 ntBASIC4.27□□□□□ -1.73
VAPAQ9P0L0 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 PPBPP1-201ENST00000510807 373 ntBASIC4.27□□□□□ -1.73
VAPAQ9P0L0 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 BPIFA4P-203ENST00000603168 689 ntBASIC4.27□□□□□ -1.73
VAPAQ9P0L0 AC073091.2-201ENST00000603205 907 ntBASIC4.27□□□□□ -1.73
VAPAQ9P0L0 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 AC105074.1-201ENST00000623380 3095 ntBASIC4.27□□□□□ -1.73
VAPAQ9P0L0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
VAPAQ9P0L0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 C4BPAP1-201ENST00000415474 1893 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 RNA5SP28-201ENST00000363841 119 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 RNA5SP113-201ENST00000410486 84 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 UBTFL3-201ENST00000418934 1024 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 DYNLL1P7-201ENST00000429273 258 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 AC022022.1-201ENST00000430304 178 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 UBTFL6-201ENST00000477929 1024 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 AC037198.2-201ENST00000478845 733 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 AC015795.1-201ENST00000513669 327 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 RNA5SP228-201ENST00000516232 133 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 RN7SKP276-201ENST00000516242 268 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 SOX5P1-201ENST00000524155 1127 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 BGLT3-201ENST00000564523 994 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 AL160290.3-201ENST00000604869 165 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 AC087385.3-201ENST00000620477 187 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 AC067931.1-201ENST00000624190 671 ntBASIC4.26□□□□□ -1.73
VAPAQ9P0L0 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.26□□□□□ -1.73
VAPAQ9P0L0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 CPHL1P-201ENST00000461341 3407 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AC021146.4-201ENST00000309229 279 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 RNA5SP307-201ENST00000362863 116 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 RNA5SP435-201ENST00000364044 108 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 RN7SKP213-201ENST00000410746 298 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 RN7SKP100-201ENST00000411258 284 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 NFYAP1-201ENST00000431953 972 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AC005154.2-201ENST00000438110 379 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AC016831.4-201ENST00000438302 307 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 GEMIN8P3-201ENST00000445417 720 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AC243772.1-201ENST00000451620 410 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 DDX39BP2-208ENST00000453923 258 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 FGF7P3-201ENST00000454645 303 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AC063943.1-201ENST00000465434 453 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AC093763.2-201ENST00000505334 1223 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 NPM1P52-201ENST00000518264 846 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.25□□□□□ -1.73
VAPAQ9P0L0 AC109635.6-201ENST00000525487 1113 ntBASIC4.25□□□□□ -1.73
VAPAQ9P0L0 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms