Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 SDR42E1P1-201ENST00000611327 477 ntBASIC4.36□□□□□ -1.71
CCNB1IP1Q9NPC3 LINC01739-205ENST00000641890 573 ntBASIC4.36□□□□□ -1.71
CCNB1IP1Q9NPC3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCNB1IP1Q9NPC3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCNB1IP1Q9NPC3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.36□□□□□ -1.71
CCNB1IP1Q9NPC3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCNB1IP1Q9NPC3 AC009313.2-201ENST00000417893 1941 ntBASIC4.36□□□□□ -1.71
CCNB1IP1Q9NPC3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
CCNB1IP1Q9NPC3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CCNB1IP1Q9NPC3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCNB1IP1Q9NPC3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCNB1IP1Q9NPC3 KPNA2P2-201ENST00000419546 1489 ntBASIC4.36□□□□□ -1.71
CCNB1IP1Q9NPC3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCNB1IP1Q9NPC3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 RNU6-1251P-201ENST00000364502 107 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 RNA5SP428-201ENST00000365129 132 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 RNU1-106P-201ENST00000384382 164 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 CHMP1B2P-201ENST00000399581 597 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 GLUD1P9-201ENST00000420997 1173 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 AC007064.3-201ENST00000422608 359 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 RPL12P46-201ENST00000436610 195 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 PRPF38AP2-201ENST00000438179 851 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 MYO5BP2-201ENST00000449815 1277 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 AC090142.2-201ENST00000483263 416 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 RNA5SP43-201ENST00000516559 110 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 MTCYBP19-201ENST00000517463 1124 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 AC027281.1-201ENST00000574178 758 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 AC209154.1-201ENST00000582156 337 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 AC010200.2-201ENST00000605098 235 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 AC138473.1-201ENST00000605717 526 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 AC023509.5-201ENST00000617434 807 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 AP002799.1-201ENST00000623552 423 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 OR14L1P-202ENST00000641545 3009 ntBASIC4.35□□□□□ -1.71
CCNB1IP1Q9NPC3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 RNA5SP305-201ENST00000362665 119 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 RNU4-4P-201ENST00000364588 130 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 ARL4AP5-201ENST00000404372 599 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AP002530.1-201ENST00000405705 684 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 MIR1178-201ENST00000408396 91 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 RNA5SP104-201ENST00000410989 118 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 GSTM3P2-201ENST00000412746 530 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AF186996.5-201ENST00000418098 904 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 OR6K4P-201ENST00000423179 955 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AL392003.1-201ENST00000434394 243 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 RPL7AP52-201ENST00000458096 790 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 snoU13.20-201ENST00000459180 104 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AC110749.1-201ENST00000462007 357 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 RN7SL177P-201ENST00000476596 299 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AC116562.1-201ENST00000485355 781 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AC140172.1-201ENST00000502928 141 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AC008694.2-201ENST00000517591 306 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms