Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
FOXP3Q9BZS1 AC005224.3-201ENST00000584683 2140 ntBASIC6.26□□□□□ -1.41
FOXP3Q9BZS1 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
FOXP3Q9BZS1 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.26□□□□□ -1.41
FOXP3Q9BZS1 AC092070.2-203ENST00000598377 3644 ntBASIC6.26□□□□□ -1.41
FOXP3Q9BZS1 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
FOXP3Q9BZS1 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
FOXP3Q9BZS1 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
FOXP3Q9BZS1 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 WDR95P-201ENST00000425638 1542 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC232271.1-201ENST00000602455 2715 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 Y_RNA.18-201ENST00000362461 102 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 RNU6-621P-201ENST00000364752 109 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 Y_RNA.303-201ENST00000364998 94 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 MYL6P5-201ENST00000412707 459 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 RPL21P108-201ENST00000413857 481 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 TCEA1P4-201ENST00000415066 844 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 MRPS36P1-201ENST00000421291 307 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 RPS7P14-201ENST00000426405 583 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 RPSAP65-201ENST00000429660 595 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 FAM96AP1-201ENST00000430879 482 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 ELOCP10-201ENST00000440624 327 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 RPL5P7-201ENST00000444235 813 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 EEF1E1P1-201ENST00000446998 430 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 RFC5P1-201ENST00000454419 874 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC094085.1-201ENST00000468914 584 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 RPL31P58-201ENST00000469001 379 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 FCF1P3-201ENST00000496394 590 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 ATP1B1P1-201ENST00000509767 915 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 RN7SKP244-201ENST00000516513 307 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC083923.1-201ENST00000523708 376 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC008055.1-201ENST00000547032 609 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 ZNF519P2-201ENST00000557032 169 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC002519.2-203ENST00000567043 837 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AL163952.1-202ENST00000569625 600 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 ELOCP34-201ENST00000604436 327 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC141002.1-201ENST00000607025 279 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC091965.4-201ENST00000607691 587 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 OR5AK4P-201ENST00000635912 903 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 THAP12P9-201ENST00000503971 2360 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC020633.1-201ENST00000468439 2247 ntBASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXP3Q9BZS1 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.24□□□□□ -1.41
FOXP3Q9BZS1 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms