Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 AC015914.2-201ENST00000618167 288 ntBASIC5.08□□□□□ -1.6
HDAC11Q96DB2 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.08□□□□□ -1.6
HDAC11Q96DB2 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.08□□□□□ -1.6
HDAC11Q96DB2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HDAC11Q96DB2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HDAC11Q96DB2 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.08□□□□□ -1.6
HDAC11Q96DB2 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC11Q96DB2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.08□□□□□ -1.6
HDAC11Q96DB2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
HDAC11Q96DB2 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HDAC11Q96DB2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.08□□□□□ -1.6
HDAC11Q96DB2 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 RNU6-225P-201ENST00000384613 103 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 MIR765-201ENST00000390226 114 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 MORF4L1P7-201ENST00000426038 703 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 RPL34P6-201ENST00000432390 345 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 HIGD1AP8-201ENST00000453927 274 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 GYG1P1-201ENST00000460864 698 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 RPL7AP6-201ENST00000477943 801 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 RPSAP50-201ENST00000481955 852 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 NPM1P29-201ENST00000483112 803 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 SUMO2P14-201ENST00000604488 293 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 KATNBL1P5-201ENST00000605015 517 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 RPL21P136-201ENST00000605378 396 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 AC025175.1-201ENST00000606482 759 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 MIR1264-201ENST00000616374 69 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 AC006213.5-201ENST00000619673 288 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 AP006248.3-201ENST00000623580 594 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 AC090617.9-201ENST00000623751 147 ntBASIC5.07□□□□□ -1.6
HDAC11Q96DB2 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HDAC11Q96DB2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 HSPA8P18-201ENST00000439846 1928 ntBASIC5.06□□□□□ -1.6
HDAC11Q96DB2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.06□□□□□ -1.6
HDAC11Q96DB2 PTP4A1P3-201ENST00000433661 420 ntBASIC5.06□□□□□ -1.6
HDAC11Q96DB2 NPM1P33-201ENST00000438918 872 ntBASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AL137845.2-201ENST00000444292 988 ntBASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 RPL7AP52-201ENST00000458096 790 ntBASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 RN7SKP147-201ENST00000517154 244 ntBASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AC005868.1-201ENST00000536421 331 ntBASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AC019206.1-201ENST00000621938 425 ntBASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 AP001002.1-201ENST00000625148 1513 ntBASIC5.06□□□□□ -1.6
HDAC11Q96DB2 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
HDAC11Q96DB2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
HDAC11Q96DB2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HDAC11Q96DB2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
HDAC11Q96DB2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.05□□□□□ -1.6
HDAC11Q96DB2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.05□□□□□ -1.6
HDAC11Q96DB2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC11Q96DB2 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HDAC11Q96DB2 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC11Q96DB2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC11Q96DB2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms