Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC055764.2-201ENST00000610089 670 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 RNA5SP440-201ENST00000612665 119 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 AL359513.1-201ENST00000614364 557 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 AL158196.1-201ENST00000616786 434 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 AC139769.3-201ENST00000618383 175 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 AL109620.1-201ENST00000618738 1197 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 AC074101.1-201ENST00000637861 241 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 CASC19-206ENST00000641028 1430 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
RFT1Q96AA3 AL445487.1-201ENST00000415694 1580 ntBASIC4.43□□□□□ -1.7
RFT1Q96AA3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFT1Q96AA3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFT1Q96AA3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFT1Q96AA3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFT1Q96AA3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFT1Q96AA3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFT1Q96AA3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFT1Q96AA3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFT1Q96AA3 IL6STP1-201ENST00000346911 1020 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 RNU6-984P-201ENST00000363236 109 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 MIR621-201ENST00000384919 96 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 RNA5SP339-201ENST00000390987 122 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AL031985.1-201ENST00000392713 418 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AL592291.1-201ENST00000403830 352 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 RNU4-27P-201ENST00000410889 139 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 RPL6P29-201ENST00000414863 865 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AL158050.1-201ENST00000416077 457 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 ATG4AP1-201ENST00000416893 538 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 E2F6P2-201ENST00000420708 748 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 VN1R42P-201ENST00000424651 344 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 CKS1BP6-201ENST00000424932 240 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AL158073.1-201ENST00000426848 1104 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 RPS29P14-201ENST00000431518 171 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 CYCSP12-201ENST00000437729 300 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC092013.1-201ENST00000438795 332 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 MED6P1-201ENST00000439659 713 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 RHEBP2-201ENST00000450289 600 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 RPL7P45-201ENST00000455851 743 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC110749.1-201ENST00000462007 357 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC133963.2-201ENST00000513686 578 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC012400.1-201ENST00000518452 381 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC134698.5-201ENST00000519444 336 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFT1Q96AA3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AP002812.4-201ENST00000532139 286 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 NDUFB4P11-201ENST00000560510 395 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC104229.1-201ENST00000561364 255 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 TMF1P1-201ENST00000576058 373 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC005776.1-201ENST00000603164 290 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC026790.2-201ENST00000606282 430 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC015982.1-201ENST00000608113 465 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 AC109309.2-201ENST00000612597 332 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFT1Q96AA3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.42□□□□□ -1.7
RFT1Q96AA3 MAPK10-304ENST00000641341 3984 ntBASIC4.42□□□□□ -1.7
RFT1Q96AA3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms