Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 CIR1P1-201ENST00000524055 1133 ntBASIC5.55□□□□□ -1.52
CIITAP33076 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.55□□□□□ -1.52
CIITAP33076 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.55□□□□□ -1.52
CIITAP33076 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.55□□□□□ -1.52
CIITAP33076 RN7SL339P-201ENST00000580597 296 ntBASIC5.55□□□□□ -1.52
CIITAP33076 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.55□□□□□ -1.52
CIITAP33076 BNIP3P32-201ENST00000600015 554 ntBASIC5.55□□□□□ -1.52
CIITAP33076 MTCO2P22-201ENST00000603246 681 ntBASIC5.55□□□□□ -1.52
CIITAP33076 AC084373.1-201ENST00000603311 235 ntBASIC5.55□□□□□ -1.52
CIITAP33076 MIR1264-201ENST00000616374 69 ntBASIC5.55□□□□□ -1.52
CIITAP33076 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.55□□□□□ -1.52
CIITAP33076 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CIITAP33076 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CIITAP33076 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.55□□□□□ -1.52
CIITAP33076 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CIITAP33076 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.55□□□□□ -1.52
CIITAP33076 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CIITAP33076 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CIITAP33076 UGT2B26P-201ENST00000508672 1613 ntBASIC5.55□□□□□ -1.52
CIITAP33076 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CIITAP33076 AC063976.2-201ENST00000425667 3556 ntBASIC5.55□□□□□ -1.52
CIITAP33076 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
CIITAP33076 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.54□□□□□ -1.52
CIITAP33076 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.54□□□□□ -1.52
CIITAP33076 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.54□□□□□ -1.52
CIITAP33076 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CIITAP33076 AC008079.2-201ENST00000623543 20396 ntBASIC5.54□□□□□ -1.52
CIITAP33076 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CIITAP33076 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.54□□□□□ -1.52
CIITAP33076 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CIITAP33076 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CIITAP33076 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CIITAP33076 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CIITAP33076 RNA5SP113-201ENST00000410486 84 ntBASIC5.54□□□□□ -1.52
CIITAP33076 AC013429.2-201ENST00000418798 781 ntBASIC5.54□□□□□ -1.52
CIITAP33076 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.54□□□□□ -1.52
CIITAP33076 MTCYBP29-201ENST00000436327 1006 ntBASIC5.54□□□□□ -1.52
CIITAP33076 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.54□□□□□ -1.52
CIITAP33076 AL356981.1-201ENST00000454879 684 ntBASIC5.54□□□□□ -1.52
CIITAP33076 NPM1P17-201ENST00000479221 602 ntBASIC5.54□□□□□ -1.52
CIITAP33076 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.54□□□□□ -1.52
CIITAP33076 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.54□□□□□ -1.52
CIITAP33076 MTND2P32-201ENST00000521584 1038 ntBASIC5.54□□□□□ -1.52
CIITAP33076 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.54□□□□□ -1.52
CIITAP33076 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CIITAP33076 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.54□□□□□ -1.52
CIITAP33076 AC087888.1-201ENST00000550884 1254 ntBASIC5.54□□□□□ -1.52
CIITAP33076 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.54□□□□□ -1.52
CIITAP33076 AL049838.1-201ENST00000563647 981 ntBASIC5.54□□□□□ -1.52
CIITAP33076 AC005242.1-201ENST00000585658 438 ntBASIC5.54□□□□□ -1.52
CIITAP33076 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.54□□□□□ -1.52
CIITAP33076 BNIP3P38-201ENST00000601117 544 ntBASIC5.54□□□□□ -1.52
CIITAP33076 AL022401.1-201ENST00000619498 108 ntBASIC5.54□□□□□ -1.52
CIITAP33076 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CIITAP33076 AC019206.1-201ENST00000621938 425 ntBASIC5.54□□□□□ -1.52
CIITAP33076 AC019080.5-201ENST00000624891 757 ntBASIC5.54□□□□□ -1.52
CIITAP33076 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.54□□□□□ -1.52
CIITAP33076 AC097655.1-201ENST00000635075 318 ntBASIC5.54□□□□□ -1.52
CIITAP33076 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CIITAP33076 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CIITAP33076 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CIITAP33076 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CIITAP33076 AC017002.4-201ENST00000604721 1525 ntBASIC5.53□□□□□ -1.52
CIITAP33076 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CIITAP33076 ZNF652P1-201ENST00000442420 1309 ntBASIC5.53□□□□□ -1.52
CIITAP33076 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CIITAP33076 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CIITAP33076 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CIITAP33076 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
CIITAP33076 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CIITAP33076 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CIITAP33076 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
CIITAP33076 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.53□□□□□ -1.52
CIITAP33076 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CIITAP33076 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.53□□□□□ -1.52
CIITAP33076 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CIITAP33076 AC104333.2-201ENST00000422630 192 ntBASIC5.53□□□□□ -1.52
CIITAP33076 AL645608.4-201ENST00000423619 154 ntBASIC5.53□□□□□ -1.52
CIITAP33076 AC114973.1-201ENST00000429057 632 ntBASIC5.53□□□□□ -1.52
CIITAP33076 MTND2P2-201ENST00000434633 945 ntBASIC5.53□□□□□ -1.52
CIITAP33076 RRM2P4-201ENST00000441721 562 ntBASIC5.53□□□□□ -1.52
CIITAP33076 AC006326.1-201ENST00000445465 787 ntBASIC5.53□□□□□ -1.52
CIITAP33076 AL096829.2-201ENST00000446582 742 ntBASIC5.53□□□□□ -1.52
CIITAP33076 BTF3P6-201ENST00000448054 499 ntBASIC5.53□□□□□ -1.52
CIITAP33076 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.53□□□□□ -1.52
CIITAP33076 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.53□□□□□ -1.52
CIITAP33076 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.53□□□□□ -1.52
CIITAP33076 OR9N1P-202ENST00000494289 481 ntBASIC5.53□□□□□ -1.52
CIITAP33076 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.53□□□□□ -1.52
CIITAP33076 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CIITAP33076 AC093770.1-201ENST00000511559 571 ntBASIC5.53□□□□□ -1.52
CIITAP33076 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.53□□□□□ -1.52
CIITAP33076 HMGB1P46-201ENST00000520062 610 ntBASIC5.53□□□□□ -1.52
CIITAP33076 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.53□□□□□ -1.52
CIITAP33076 NOP56P3-201ENST00000549457 385 ntBASIC5.53□□□□□ -1.52
CIITAP33076 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.53□□□□□ -1.52
CIITAP33076 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.53□□□□□ -1.52
CIITAP33076 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.53□□□□□ -1.52
CIITAP33076 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.53□□□□□ -1.52
CIITAP33076 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms