Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 BMS1P10-201ENST00000443754 1120 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXC12P31275 PDSS1P2-201ENST00000449397 678 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 PPIAP20-201ENST00000449839 135 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXC12P31275 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXC12P31275 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXC12P31275 RPL7P6-201ENST00000480903 738 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC12P31275 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXC12P31275 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC12P31275 SNORA74.1-201ENST00000516320 180 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 RNU6-506P-201ENST00000516553 94 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC5.8□□□□□ -1.48
HOXC12P31275 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXC12P31275 IGLV3-6-201ENST00000523937 250 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXC12P31275 DEFB131D-201ENST00000526803 184 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.8□□□□□ -1.48
HOXC12P31275 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.8□□□□□ -1.48
HOXC12P31275 OR52K3P-201ENST00000531655 943 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.8□□□□□ -1.48
HOXC12P31275 AC027667.1-201ENST00000545814 304 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 FXNP1-201ENST00000555153 337 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXC12P31275 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.8□□□□□ -1.48
HOXC12P31275 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.8□□□□□ -1.48
HOXC12P31275 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXC12P31275 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXC12P31275 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.8□□□□□ -1.48
HOXC12P31275 AP000894.4-201ENST00000610185 483 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 AL352984.2-202ENST00000613699 155 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 AL122125.1-201ENST00000616999 600 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.8□□□□□ -1.48
HOXC12P31275 AP000577.1-201ENST00000624366 878 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 AL008636.1-201ENST00000625038 1018 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXC12P31275 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXC12P31275 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXC12P31275 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC12P31275 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.8□□□□□ -1.48
HOXC12P31275 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC12P31275 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC12P31275 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC12P31275 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HOXC12P31275 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HOXC12P31275 AL596244.1-201ENST00000567068 3779 ntBASIC5.8□□□□□ -1.48
HOXC12P31275 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
HOXC12P31275 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
HOXC12P31275 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC12P31275 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC12P31275 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC12P31275 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXC12P31275 AC095050.2-201ENST00000510748 1458 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
HOXC12P31275 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
HOXC12P31275 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXC12P31275 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC12P31275 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC12P31275 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC12P31275 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC12P31275 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HOXC12P31275 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HOXC12P31275 OR4G2P-201ENST00000328113 903 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC12P31275 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC12P31275 MIR640-201ENST00000385086 96 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC12P31275 AL590635.1-201ENST00000406314 586 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 BTF3P7-201ENST00000407097 488 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 RPS6P23-201ENST00000413224 722 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.79□□□□□ -1.48
HOXC12P31275 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HOXC12P31275 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC12P31275 AL953862.1-201ENST00000423016 168 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AC008753.1-201ENST00000423096 284 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC12P31275 ISCA1P1-201ENST00000426679 387 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AC073335.1-201ENST00000427776 363 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.79□□□□□ -1.48
HOXC12P31275 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC12P31275 AC112492.2-201ENST00000432774 1030 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXC12P31275 AC007679.3-201ENST00000434035 414 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.79□□□□□ -1.48
HOXC12P31275 GAPDHP59-201ENST00000435908 267 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXC12P31275 COL11A2P1-205ENST00000441798 676 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 GAPDHP33-201ENST00000443168 1013 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 Z83838.1-202ENST00000456225 839 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 SULT1D1P-201ENST00000458020 882 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AC094085.1-201ENST00000468914 584 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 SNRPCP3-201ENST00000474888 476 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AC013828.1-201ENST00000481845 158 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.79□□□□□ -1.48
HOXC12P31275 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.79□□□□□ -1.48
HOXC12P31275 AC025674.1-201ENST00000507074 324 ntBASIC5.79□□□□□ -1.48
HOXC12P31275 SUMO2P7-201ENST00000511179 285 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms