Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.9□□□□□ -1.31
LIG1P18858 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.9□□□□□ -1.31
LIG1P18858 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.9□□□□□ -1.31
LIG1P18858 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.9□□□□□ -1.31
LIG1P18858 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.9□□□□□ -1.31
LIG1P18858 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.9□□□□□ -1.31
LIG1P18858 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
LIG1P18858 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.9□□□□□ -1.31
LIG1P18858 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.9□□□□□ -1.31
LIG1P18858 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
LIG1P18858 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.9□□□□□ -1.31
LIG1P18858 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.9□□□□□ -1.31
LIG1P18858 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
LIG1P18858 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
LIG1P18858 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.9□□□□□ -1.31
LIG1P18858 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
LIG1P18858 AC138393.1-206ENST00000540997 1886 ntBASIC6.9□□□□□ -1.31
LIG1P18858 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LIG1P18858 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG1P18858 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LIG1P18858 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
LIG1P18858 U3.10-201ENST00000364459 214 ntBASIC6.89□□□□□ -1.31
LIG1P18858 Y_RNA.303-201ENST00000364998 94 ntBASIC6.89□□□□□ -1.31
LIG1P18858 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
LIG1P18858 OR1L1-202ENST00000373686 1083 ntBASIC6.89□□□□□ -1.31
LIG1P18858 RNU6-729P-201ENST00000384399 107 ntBASIC6.89□□□□□ -1.31
LIG1P18858 MIR621-201ENST00000384919 96 ntBASIC6.89□□□□□ -1.31
LIG1P18858 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG1P18858 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG1P18858 CCDC58P2-201ENST00000417131 366 ntBASIC6.89□□□□□ -1.31
LIG1P18858 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG1P18858 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG1P18858 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG1P18858 AC113412.1-201ENST00000425840 504 ntBASIC6.89□□□□□ -1.31
LIG1P18858 DSTNP5-201ENST00000427921 523 ntBASIC6.89□□□□□ -1.31
LIG1P18858 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG1P18858 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG1P18858 AC091862.1-201ENST00000438016 1100 ntBASIC6.89□□□□□ -1.31
LIG1P18858 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.89□□□□□ -1.31
LIG1P18858 AL592447.1-201ENST00000447592 540 ntBASIC6.89□□□□□ -1.31
LIG1P18858 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LIG1P18858 HIGD1AP16-201ENST00000450986 258 ntBASIC6.89□□□□□ -1.31
LIG1P18858 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.89□□□□□ -1.31
LIG1P18858 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG1P18858 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.89□□□□□ -1.31
LIG1P18858 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG1P18858 HMGB3P13-201ENST00000511263 607 ntBASIC6.89□□□□□ -1.31
LIG1P18858 AC109445.1-201ENST00000512356 383 ntBASIC6.89□□□□□ -1.31
LIG1P18858 AC108120.2-201ENST00000512973 294 ntBASIC6.89□□□□□ -1.31
LIG1P18858 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG1P18858 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG1P18858 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.89□□□□□ -1.31
LIG1P18858 AP001207.1-201ENST00000524051 481 ntBASIC6.89□□□□□ -1.31
LIG1P18858 OR4A43P-201ENST00000532938 908 ntBASIC6.89□□□□□ -1.31
LIG1P18858 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LIG1P18858 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG1P18858 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG1P18858 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
LIG1P18858 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.89□□□□□ -1.31
LIG1P18858 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG1P18858 ZNF519P2-201ENST00000557032 169 ntBASIC6.89□□□□□ -1.31
LIG1P18858 NPM1P47-201ENST00000560843 856 ntBASIC6.89□□□□□ -1.31
LIG1P18858 BGLT3-201ENST00000564523 994 ntBASIC6.89□□□□□ -1.31
LIG1P18858 TPRKBP2-201ENST00000565969 475 ntBASIC6.89□□□□□ -1.31
LIG1P18858 ATP5F1P7-201ENST00000567330 760 ntBASIC6.89□□□□□ -1.31
LIG1P18858 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.89□□□□□ -1.31
LIG1P18858 AC068020.1-201ENST00000594215 661 ntBASIC6.89□□□□□ -1.31
LIG1P18858 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG1P18858 AC130352.1-201ENST00000602979 661 ntBASIC6.89□□□□□ -1.31
LIG1P18858 uc_338.26-201ENST00000612659 160 ntBASIC6.89□□□□□ -1.31
LIG1P18858 AC005840.5-201ENST00000619166 599 ntBASIC6.89□□□□□ -1.31
LIG1P18858 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG1P18858 AC006840.1-201ENST00000623069 542 ntBASIC6.89□□□□□ -1.31
LIG1P18858 RPL23AP61-201ENST00000623642 466 ntBASIC6.89□□□□□ -1.31
LIG1P18858 AP001052.1-201ENST00000626421 99 ntBASIC6.89□□□□□ -1.31
LIG1P18858 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG1P18858 AC087565.3-203ENST00000641018 837 ntBASIC6.89□□□□□ -1.31
LIG1P18858 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.89□□□□□ -1.31
LIG1P18858 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
LIG1P18858 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.89□□□□□ -1.31
LIG1P18858 LINC02019-201ENST00000608605 2060 ntBASIC6.89□□□□□ -1.31
LIG1P18858 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LIG1P18858 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.89□□□□□ -1.31
LIG1P18858 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LIG1P18858 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
LIG1P18858 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
LIG1P18858 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LIG1P18858 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LIG1P18858 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LIG1P18858 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
LIG1P18858 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LIG1P18858 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
LIG1P18858 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LIG1P18858 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LIG1P18858 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
LIG1P18858 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.88□□□□□ -1.31
LIG1P18858 AC004656.1-201ENST00000568479 4951 ntBASIC6.88□□□□□ -1.31
LIG1P18858 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.88□□□□□ -1.31
LIG1P18858 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LIG1P18858 ATP8A2P3-201ENST00000426792 1536 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms