Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNU6ATAC-201ENST00000408749 126 ntBASIC7.52□□□□□ -1.2
TOP2AP11388 AL691449.1-201ENST00000426570 421 ntBASIC7.52□□□□□ -1.2
TOP2AP11388 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC7.52□□□□□ -1.2
TOP2AP11388 AP005901.4-201ENST00000577336 569 ntBASIC7.52□□□□□ -1.2
TOP2AP11388 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC7.52□□□□□ -1.2
TOP2AP11388 AC005520.3-201ENST00000602874 370 ntBASIC7.52□□□□□ -1.2
TOP2AP11388 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.52□□□□□ -1.2
TOP2AP11388 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC7.52□□□□□ -1.2
TOP2AP11388 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
TOP2AP11388 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
TOP2AP11388 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TOP2AP11388 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC7.52□□□□□ -1.21
TOP2AP11388 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC7.52□□□□□ -1.21
TOP2AP11388 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TOP2AP11388 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
TOP2AP11388 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
TOP2AP11388 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
TOP2AP11388 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
TOP2AP11388 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
TOP2AP11388 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC7.52□□□□□ -1.21
TOP2AP11388 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
TOP2AP11388 RNA5SP175-201ENST00000364275 119 ntBASIC7.52□□□□□ -1.21
TOP2AP11388 MIR670-201ENST00000390142 98 ntBASIC7.52□□□□□ -1.21
TOP2AP11388 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC7.52□□□□□ -1.21
TOP2AP11388 OR8F1P-201ENST00000425243 930 ntBASIC7.52□□□□□ -1.21
TOP2AP11388 VN1R32P-201ENST00000452234 905 ntBASIC7.52□□□□□ -1.21
TOP2AP11388 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC7.52□□□□□ -1.21
TOP2AP11388 NPM1P21-201ENST00000513394 762 ntBASIC7.52□□□□□ -1.21
TOP2AP11388 AP003400.2-201ENST00000624036 666 ntBASIC7.52□□□□□ -1.21
TOP2AP11388 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
TOP2AP11388 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
TOP2AP11388 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
TOP2AP11388 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TOP2AP11388 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TOP2AP11388 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
TOP2AP11388 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC7.51□□□□□ -1.21
TOP2AP11388 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
TOP2AP11388 OR11H4-201ENST00000315409 1082 ntBASIC7.51□□□□□ -1.21
TOP2AP11388 RN7SKP159-201ENST00000410657 292 ntBASIC7.51□□□□□ -1.21
TOP2AP11388 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC7.51□□□□□ -1.21
TOP2AP11388 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC7.51□□□□□ -1.21
TOP2AP11388 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC7.51□□□□□ -1.21
TOP2AP11388 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.51□□□□□ -1.21
TOP2AP11388 IFITM8P-201ENST00000522529 394 ntBASIC7.51□□□□□ -1.21
TOP2AP11388 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.51□□□□□ -1.21
TOP2AP11388 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.51□□□□□ -1.21
TOP2AP11388 AC234782.5-201ENST00000617723 324 ntBASIC7.51□□□□□ -1.21
TOP2AP11388 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC7.51□□□□□ -1.21
TOP2AP11388 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
TOP2AP11388 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TOP2AP11388 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
TOP2AP11388 USP45-204ENST00000369233 2514 ntTSL 5 BASIC7.51□□□□□ -1.21
TOP2AP11388 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.5□□□□□ -1.21
TOP2AP11388 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TOP2AP11388 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TOP2AP11388 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
TOP2AP11388 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TOP2AP11388 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC7.5□□□□□ -1.21
TOP2AP11388 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TOP2AP11388 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
TOP2AP11388 HMGB3P5-201ENST00000428894 612 ntBASIC7.5□□□□□ -1.21
TOP2AP11388 AC018644.1-201ENST00000429934 551 ntBASIC7.5□□□□□ -1.21
TOP2AP11388 AC007389.2-201ENST00000434630 306 ntBASIC7.5□□□□□ -1.21
TOP2AP11388 RPL6P5-201ENST00000445678 828 ntBASIC7.5□□□□□ -1.21
TOP2AP11388 RPL23AP81-201ENST00000455252 467 ntBASIC7.5□□□□□ -1.21
TOP2AP11388 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.5□□□□□ -1.21
TOP2AP11388 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.5□□□□□ -1.21
TOP2AP11388 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC7.5□□□□□ -1.21
TOP2AP11388 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TOP2AP11388 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TOP2AP11388 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC7.5□□□□□ -1.21
TOP2AP11388 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
TOP2AP11388 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TOP2AP11388 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC7.49□□□□□ -1.21
TOP2AP11388 AP001157.1-201ENST00000550837 2339 ntBASIC7.49□□□□□ -1.21
TOP2AP11388 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
TOP2AP11388 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TOP2AP11388 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TOP2AP11388 AF213884.1-201ENST00000488102 463 ntBASIC7.49□□□□□ -1.21
TOP2AP11388 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC7.49□□□□□ -1.21
TOP2AP11388 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TOP2AP11388 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC7.49□□□□□ -1.21
TOP2AP11388 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
TOP2AP11388 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TOP2AP11388 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC7.49□□□□□ -1.21
TOP2AP11388 LDHAL6CP-202ENST00000550738 3224 ntBASIC7.49□□□□□ -1.21
TOP2AP11388 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
TOP2AP11388 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TOP2AP11388 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
TOP2AP11388 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TOP2AP11388 AC108032.1-201ENST00000416706 207 ntBASIC7.48□□□□□ -1.21
TOP2AP11388 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC7.48□□□□□ -1.21
TOP2AP11388 AC010460.1-201ENST00000507087 466 ntBASIC7.48□□□□□ -1.21
TOP2AP11388 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TOP2AP11388 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC7.48□□□□□ -1.21
TOP2AP11388 AC087499.8-201ENST00000578406 226 ntBASIC7.48□□□□□ -1.21
TOP2AP11388 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC7.48□□□□□ -1.21
TOP2AP11388 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC7.48□□□□□ -1.21
TOP2AP11388 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TOP2AP11388 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms