Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.4□□□□□ -1.54
TOP1P11387 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.4□□□□□ -1.54
TOP1P11387 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.4□□□□□ -1.54
TOP1P11387 AP005119.2-201ENST00000579735 1105 ntBASIC5.4□□□□□ -1.54
TOP1P11387 AC069061.3-201ENST00000582254 823 ntBASIC5.4□□□□□ -1.54
TOP1P11387 MIR5096-201ENST00000583713 70 ntBASIC5.4□□□□□ -1.54
TOP1P11387 AP003499.2-201ENST00000624100 483 ntBASIC5.4□□□□□ -1.54
TOP1P11387 AL049536.1-201ENST00000625043 744 ntBASIC5.4□□□□□ -1.54
TOP1P11387 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TOP1P11387 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.4□□□□□ -1.55
TOP1P11387 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TOP1P11387 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TOP1P11387 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TOP1P11387 OR56B2P-202ENST00000641377 2453 ntBASIC5.39□□□□□ -1.55
TOP1P11387 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.39□□□□□ -1.55
TOP1P11387 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.39□□□□□ -1.55
TOP1P11387 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.39□□□□□ -1.55
TOP1P11387 A2MP1-204ENST00000566278 4130 ntBASIC5.39□□□□□ -1.55
TOP1P11387 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TOP1P11387 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TOP1P11387 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TOP1P11387 OR1F12-201ENST00000402365 945 ntBASIC5.39□□□□□ -1.55
TOP1P11387 AL080315.1-201ENST00000406055 466 ntBASIC5.39□□□□□ -1.55
TOP1P11387 RN7SKP199-201ENST00000410325 305 ntBASIC5.39□□□□□ -1.55
TOP1P11387 RAB9AP4-201ENST00000415230 609 ntBASIC5.39□□□□□ -1.55
TOP1P11387 RPS27AP7-201ENST00000422792 455 ntBASIC5.39□□□□□ -1.55
TOP1P11387 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.39□□□□□ -1.55
TOP1P11387 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.39□□□□□ -1.55
TOP1P11387 RPEP3-201ENST00000425462 676 ntBASIC5.39□□□□□ -1.55
TOP1P11387 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.39□□□□□ -1.55
TOP1P11387 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.39□□□□□ -1.55
TOP1P11387 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.39□□□□□ -1.55
TOP1P11387 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.39□□□□□ -1.55
TOP1P11387 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.39□□□□□ -1.55
TOP1P11387 AC084783.1-201ENST00000565846 910 ntBASIC5.39□□□□□ -1.55
TOP1P11387 MTND2P13-201ENST00000577438 1039 ntBASIC5.39□□□□□ -1.55
TOP1P11387 MIR4715-201ENST00000584117 79 ntBASIC5.39□□□□□ -1.55
TOP1P11387 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.39□□□□□ -1.55
TOP1P11387 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.39□□□□□ -1.55
TOP1P11387 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.39□□□□□ -1.55
TOP1P11387 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.39□□□□□ -1.55
TOP1P11387 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.39□□□□□ -1.55
TOP1P11387 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.39□□□□□ -1.55
TOP1P11387 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TOP1P11387 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TOP1P11387 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TOP1P11387 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.38□□□□□ -1.55
TOP1P11387 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TOP1P11387 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TOP1P11387 BMS1P3-201ENST00000372011 932 ntBASIC5.38□□□□□ -1.55
TOP1P11387 SDHCP2-201ENST00000398565 501 ntBASIC5.38□□□□□ -1.55
TOP1P11387 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.38□□□□□ -1.55
TOP1P11387 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.38□□□□□ -1.55
TOP1P11387 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.38□□□□□ -1.55
TOP1P11387 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.38□□□□□ -1.55
TOP1P11387 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TOP1P11387 CYCSP42-201ENST00000450823 238 ntBASIC5.38□□□□□ -1.55
TOP1P11387 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.38□□□□□ -1.55
TOP1P11387 ISCUP1-201ENST00000454451 448 ntBASIC5.38□□□□□ -1.55
TOP1P11387 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
TOP1P11387 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.38□□□□□ -1.55
TOP1P11387 RAB9BP1-201ENST00000519581 626 ntBASIC5.38□□□□□ -1.55
TOP1P11387 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.38□□□□□ -1.55
TOP1P11387 HIGD1AP5-201ENST00000529959 259 ntBASIC5.38□□□□□ -1.55
TOP1P11387 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.38□□□□□ -1.55
TOP1P11387 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.38□□□□□ -1.55
TOP1P11387 RPL12P25-202ENST00000598100 674 ntBASIC5.38□□□□□ -1.55
TOP1P11387 AC008782.1-201ENST00000603386 430 ntBASIC5.38□□□□□ -1.55
TOP1P11387 AC234782.5-201ENST00000617723 324 ntBASIC5.38□□□□□ -1.55
TOP1P11387 AL359757.1-201ENST00000623176 255 ntBASIC5.38□□□□□ -1.55
TOP1P11387 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TOP1P11387 AC107027.3-201ENST00000565095 3473 ntBASIC5.38□□□□□ -1.55
TOP1P11387 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.38□□□□□ -1.55
TOP1P11387 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TOP1P11387 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
TOP1P11387 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
TOP1P11387 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
TOP1P11387 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
TOP1P11387 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
TOP1P11387 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TOP1P11387 AL391684.1-202ENST00000641293 1636 ntBASIC5.37□□□□□ -1.55
TOP1P11387 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.37□□□□□ -1.55
TOP1P11387 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.37□□□□□ -1.55
TOP1P11387 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.37□□□□□ -1.55
TOP1P11387 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.37□□□□□ -1.55
TOP1P11387 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.37□□□□□ -1.55
TOP1P11387 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TOP1P11387 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
TOP1P11387 SNORA68.2-201ENST00000391263 128 ntBASIC5.37□□□□□ -1.55
TOP1P11387 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.37□□□□□ -1.55
TOP1P11387 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.37□□□□□ -1.55
TOP1P11387 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.37□□□□□ -1.55
TOP1P11387 AC009220.1-201ENST00000451614 275 ntBASIC5.37□□□□□ -1.55
TOP1P11387 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.37□□□□□ -1.55
TOP1P11387 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.37□□□□□ -1.55
TOP1P11387 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.37□□□□□ -1.55
TOP1P11387 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.37□□□□□ -1.55
TOP1P11387 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.37□□□□□ -1.55
TOP1P11387 GSTP1P1-201ENST00000548078 319 ntBASIC5.37□□□□□ -1.55
TOP1P11387 SULT1C2P2-201ENST00000562517 294 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms