Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC6P09630 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.43□□□□□ -1.54
HOXC6P09630 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC6P09630 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC6P09630 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC6P09630 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC6P09630 AC079148.1-201ENST00000565944 819 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 AC069061.3-201ENST00000582254 823 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 AC004223.2-201ENST00000590309 544 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HOXC6P09630 AC133794.1-201ENST00000602731 914 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 AC115286.1-201ENST00000604298 434 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 AC010857.1-201ENST00000606398 594 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 AC004908.3-201ENST00000610248 625 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC6P09630 LINC00216-201ENST00000623548 1126 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 AC011944.2-201ENST00000624440 683 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 AL445984.1-201ENST00000637834 659 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 AC119674.1-220ENST00000641502 1048 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC6P09630 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HOXC6P09630 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXC6P09630 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXC6P09630 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC6P09630 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC6P09630 AC120338.1-201ENST00000625074 1541 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 TLK1P1-201ENST00000456760 2440 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC6P09630 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC6P09630 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HOXC6P09630 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
HOXC6P09630 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC6P09630 AC004817.4-201ENST00000602396 3625 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC6P09630 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC6P09630 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC6P09630 AL050305.1-201ENST00000399993 1230 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 NACAP7-201ENST00000407371 609 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 MIR1193-201ENST00000408109 78 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC6P09630 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC6P09630 OR13Z1P-201ENST00000416141 834 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 AC140479.3-201ENST00000418944 1126 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 REREP1Y-201ENST00000422655 198 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 MTCO2P1-201ENST00000424648 477 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC6P09630 MRPL50P1-201ENST00000431951 384 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC6P09630 RPS17P8-201ENST00000434525 335 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 REREP2Y-201ENST00000439103 200 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC6P09630 AC007537.2-201ENST00000472093 511 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 DEFB109A-201ENST00000482450 265 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC6P09630 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.42□□□□□ -1.54
HOXC6P09630 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC6P09630 AC068339.2-201ENST00000534395 618 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC6P09630 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC6P09630 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC6P09630 CD24P2-201ENST00000565486 219 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXC6P09630 KPNA2P3-201ENST00000584190 848 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 AC006116.5-201ENST00000591936 559 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 OR7M1P-201ENST00000608946 533 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 CR589904.2-201ENST00000612533 440 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC6P09630 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC6P09630 AL049536.1-201ENST00000625043 744 ntBASIC5.42□□□□□ -1.54
HOXC6P09630 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC6P09630 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC6P09630 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXC6P09630 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXC6P09630 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
HOXC6P09630 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXC6P09630 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC6P09630 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXC6P09630 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC6P09630 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC6P09630 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC6P09630 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC6P09630 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
HOXC6P09630 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HOXC6P09630 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC6P09630 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
HOXC6P09630 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXC6P09630 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
HOXC6P09630 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.41□□□□□ -1.54
HOXC6P09630 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
HOXC6P09630 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXC6P09630 OR4K17-201ENST00000315543 1032 ntBASIC5.41□□□□□ -1.54
HOXC6P09630 Y_RNA.62-201ENST00000362840 99 ntBASIC5.41□□□□□ -1.54
HOXC6P09630 RNA5SP515-201ENST00000364570 118 ntBASIC5.41□□□□□ -1.54
HOXC6P09630 RNA5SP509-201ENST00000364577 119 ntBASIC5.41□□□□□ -1.54
HOXC6P09630 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.41□□□□□ -1.54
HOXC6P09630 RPL21P67-201ENST00000402896 478 ntBASIC5.41□□□□□ -1.54
HOXC6P09630 RN7SKP267-201ENST00000410381 285 ntBASIC5.41□□□□□ -1.54
HOXC6P09630 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.41□□□□□ -1.54
HOXC6P09630 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms