Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.8□□□□□ -1.16
RNF40O75150 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
RNF40O75150 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF40O75150 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
RNF40O75150 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
RNF40O75150 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
RNF40O75150 AC013488.1-201ENST00000526618 1838 ntBASIC7.8□□□□□ -1.16
RNF40O75150 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF40O75150 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF40O75150 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.8□□□□□ -1.16
RNF40O75150 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF40O75150 AC015871.3-201ENST00000618835 2261 ntBASIC7.8□□□□□ -1.16
RNF40O75150 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF40O75150 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
RNF40O75150 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF40O75150 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RNF40O75150 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF40O75150 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF40O75150 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF40O75150 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.79□□□□□ -1.16
RNF40O75150 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.79□□□□□ -1.16
RNF40O75150 EFTUD1P2-201ENST00000514817 1603 ntBASIC7.79□□□□□ -1.16
RNF40O75150 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF40O75150 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 Y_RNA.255-201ENST00000364581 97 ntBASIC7.79□□□□□ -1.16
RNF40O75150 RNU6-108P-201ENST00000365558 107 ntBASIC7.79□□□□□ -1.16
RNF40O75150 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 SNORA19-201ENST00000384737 128 ntBASIC7.79□□□□□ -1.16
RNF40O75150 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RNF40O75150 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 GAS8-AS1-201ENST00000408886 435 ntBASIC7.79□□□□□ -1.16
RNF40O75150 EIF4A1P5-201ENST00000428062 1095 ntBASIC7.79□□□□□ -1.16
RNF40O75150 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF40O75150 PRPF38AP2-201ENST00000438179 851 ntBASIC7.79□□□□□ -1.16
RNF40O75150 RPL7P59-201ENST00000447700 943 ntBASIC7.79□□□□□ -1.16
RNF40O75150 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 TREML3P-201ENST00000457327 501 ntBASIC7.79□□□□□ -1.16
RNF40O75150 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF40O75150 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC7.79□□□□□ -1.16
RNF40O75150 AC098591.2-201ENST00000510152 315 ntBASIC7.79□□□□□ -1.16
RNF40O75150 SCARNA20.1-201ENST00000516009 138 ntBASIC7.79□□□□□ -1.16
RNF40O75150 MTND6P19-201ENST00000519399 524 ntBASIC7.79□□□□□ -1.16
RNF40O75150 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.79□□□□□ -1.16
RNF40O75150 AC068831.4-201ENST00000556118 109 ntBASIC7.79□□□□□ -1.16
RNF40O75150 FDPSP3-201ENST00000556903 1013 ntBASIC7.79□□□□□ -1.16
RNF40O75150 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC7.79□□□□□ -1.16
RNF40O75150 RN7SL131P-201ENST00000579043 256 ntBASIC7.79□□□□□ -1.16
RNF40O75150 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF40O75150 MIR8082-201ENST00000612488 81 ntBASIC7.79□□□□□ -1.16
RNF40O75150 AC083806.3-201ENST00000614016 455 ntBASIC7.79□□□□□ -1.16
RNF40O75150 AC096861.1-201ENST00000616652 240 ntBASIC7.79□□□□□ -1.16
RNF40O75150 AC007347.2-201ENST00000623044 180 ntBASIC7.79□□□□□ -1.16
RNF40O75150 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF40O75150 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RNF40O75150 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF40O75150 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF40O75150 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
RNF40O75150 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF40O75150 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RNF40O75150 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF40O75150 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF40O75150 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF40O75150 GTF2IP1-202ENST00000614592 2047 ntBASIC7.78□□□□□ -1.16
RNF40O75150 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF40O75150 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF40O75150 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
RNF40O75150 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RNF40O75150 SNRPEP3-201ENST00000338402 276 ntBASIC7.78□□□□□ -1.16
RNF40O75150 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF40O75150 RNA5SP396-201ENST00000364834 120 ntBASIC7.78□□□□□ -1.16
RNF40O75150 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.78□□□□□ -1.16
RNF40O75150 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF40O75150 CD3D-202ENST00000392884 476 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF40O75150 BTBD10P2-201ENST00000404779 676 ntBASIC7.78□□□□□ -1.16
RNF40O75150 RNU6-370P-201ENST00000411008 104 ntBASIC7.78□□□□□ -1.16
RNF40O75150 MCFD2P1-201ENST00000417812 300 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF40O75150 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF40O75150 SNX18P3-201ENST00000424993 835 ntBASIC7.78□□□□□ -1.16
RNF40O75150 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF40O75150 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.78□□□□□ -1.16
RNF40O75150 PA2G4P1-201ENST00000442248 1197 ntBASIC7.78□□□□□ -1.16
RNF40O75150 H2AFZP6-201ENST00000444403 394 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AL035666.1-201ENST00000446195 348 ntBASIC7.78□□□□□ -1.16
RNF40O75150 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC7.78□□□□□ -1.16
RNF40O75150 ELOCP24-201ENST00000456370 334 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms