Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC107027.3-201ENST00000565095 3473 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SMAD6O43541 RNU6-792P-201ENST00000363490 107 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 RN7SKP224-201ENST00000364140 325 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 RNU6-40P-201ENST00000384254 107 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 U3.32-201ENST00000408116 212 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 AL592310.1-201ENST00000414330 671 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 CHEK2P3-201ENST00000416118 248 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.11□□□□□ -1.59
SMAD6O43541 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.11□□□□□ -1.59
SMAD6O43541 MTCO1P51-201ENST00000427672 1060 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.11□□□□□ -1.59
SMAD6O43541 USP9YP28-201ENST00000435142 589 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 RPL7AP61-201ENST00000443410 636 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.11□□□□□ -1.59
SMAD6O43541 SETD6P1-201ENST00000444575 317 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 AL354714.3-201ENST00000447284 493 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.11□□□□□ -1.59
SMAD6O43541 NPM1P17-201ENST00000479221 602 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 AC140172.1-201ENST00000502928 141 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.11□□□□□ -1.59
SMAD6O43541 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.11□□□□□ -1.59
SMAD6O43541 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.11□□□□□ -1.59
SMAD6O43541 BTF3P13-201ENST00000513224 490 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.11□□□□□ -1.59
SMAD6O43541 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.11□□□□□ -1.59
SMAD6O43541 AP001922.4-201ENST00000526967 290 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.11□□□□□ -1.59
SMAD6O43541 AC074029.2-201ENST00000551045 634 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.11□□□□□ -1.59
SMAD6O43541 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.11□□□□□ -1.59
SMAD6O43541 AC090666.1-201ENST00000578241 445 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.11□□□□□ -1.59
SMAD6O43541 PRPF19P1-201ENST00000584766 898 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.11□□□□□ -1.59
SMAD6O43541 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.11□□□□□ -1.59
SMAD6O43541 RPP40P2-201ENST00000603596 712 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 AC087783.2-201ENST00000605070 562 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.11□□□□□ -1.59
SMAD6O43541 AC112503.1-201ENST00000608436 391 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.11□□□□□ -1.59
SMAD6O43541 Mico1.1-201ENST00000611698 204 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.11□□□□□ -1.59
SMAD6O43541 CYCSP41-201ENST00000616920 296 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 AC087385.3-201ENST00000620477 187 ntBASIC5.11□□□□□ -1.59
SMAD6O43541 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.11□□□□□ -1.59
SMAD6O43541 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.11□□□□□ -1.59
SMAD6O43541 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.11□□□□□ -1.59
SMAD6O43541 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.11□□□□□ -1.59
SMAD6O43541 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SMAD6O43541 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SMAD6O43541 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.11□□□□□ -1.59
SMAD6O43541 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SMAD6O43541 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.11□□□□□ -1.59
SMAD6O43541 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SMAD6O43541 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SMAD6O43541 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SMAD6O43541 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SMAD6O43541 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SMAD6O43541 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
SMAD6O43541 SNORA70.10-201ENST00000384515 134 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SMAD6O43541 MIR937-201ENST00000401271 86 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 RPL5P19-201ENST00000404228 893 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 RN7SKP247-201ENST00000411094 308 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 AC107081.1-201ENST00000414975 361 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 AF186996.5-201ENST00000418098 904 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.1□□□□□ -1.59
SMAD6O43541 TCEA1P2-201ENST00000420496 906 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 MTND4P24-201ENST00000424002 397 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.1□□□□□ -1.59
SMAD6O43541 MTND4LP13-201ENST00000425022 298 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 AC013262.1-201ENST00000426710 252 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 VN1R108P-201ENST00000431580 830 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.1□□□□□ -1.59
SMAD6O43541 HSPD1P14-201ENST00000432666 1618 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 CDY12P-201ENST00000440679 1015 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 AC007000.2-201ENST00000442564 487 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 OR7E125P-201ENST00000443450 846 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 AL137845.2-201ENST00000444292 988 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 CDY13P-201ENST00000445813 1015 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 EIF2S2P2-201ENST00000447161 982 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 RPL31P44-201ENST00000447680 377 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 OR52E3P-201ENST00000452083 936 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 AL645937.3-201ENST00000453647 936 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 HMGB1P4-201ENST00000455362 567 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 AC091180.1-201ENST00000462104 372 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 NDUFA5P9-201ENST00000472609 340 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 RN7SL319P-201ENST00000480656 221 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.1□□□□□ -1.59
SMAD6O43541 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.1□□□□□ -1.59
SMAD6O43541 NIFKP7-201ENST00000503365 834 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.1□□□□□ -1.59
SMAD6O43541 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SMAD6O43541 AC107918.3-201ENST00000533272 382 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 GCSHP4-201ENST00000538792 439 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 AC068993.1-201ENST00000546724 589 ntBASIC5.1□□□□□ -1.59
SMAD6O43541 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.1□□□□□ -1.59
SMAD6O43541 AC040958.1-201ENST00000561102 201 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms