Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN3O15551 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN3O15551 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN3O15551 UGT2B26P-201ENST00000508672 1613 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 AC087565.3-202ENST00000642085 1603 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CLDN3O15551 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN3O15551 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN3O15551 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CLDN3O15551 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN3O15551 RPS3AP23-201ENST00000401762 784 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 AC069213.2-201ENST00000420238 366 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.06□□□□□ -1.6
CLDN3O15551 AJ239321.1-201ENST00000424255 564 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 AP000936.3-201ENST00000438127 255 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 AL162591.2-201ENST00000449634 317 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 NPM1P39-201ENST00000449818 867 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CLDN3O15551 SCARNA10-201ENST00000459255 330 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN3O15551 AC108751.2-201ENST00000469993 231 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN3O15551 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.06□□□□□ -1.6
CLDN3O15551 AC007016.1-201ENST00000512110 244 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
CLDN3O15551 RN7SKP46-201ENST00000515942 234 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN3O15551 RNF138P2-201ENST00000603490 592 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 IMMP1LP1-201ENST00000605170 488 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 AC019131.2-201ENST00000609071 870 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN3O15551 uc_338.18-201ENST00000615451 175 ntBASIC5.06□□□□□ -1.6
CLDN3O15551 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN3O15551 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN3O15551 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN3O15551 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLDN3O15551 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN3O15551 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLDN3O15551 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN3O15551 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN3O15551 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN3O15551 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CLDN3O15551 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CLDN3O15551 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN3O15551 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN3O15551 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN3O15551 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN3O15551 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN3O15551 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN3O15551 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN3O15551 RNU6-1251P-201ENST00000364502 107 ntBASIC5.05□□□□□ -1.6
CLDN3O15551 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN3O15551 NPM1P26-201ENST00000426339 738 ntBASIC5.05□□□□□ -1.6
CLDN3O15551 RPL23AP4-201ENST00000427757 463 ntBASIC5.05□□□□□ -1.6
CLDN3O15551 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN3O15551 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN3O15551 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN3O15551 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN3O15551 AC022431.1-201ENST00000450941 438 ntBASIC5.05□□□□□ -1.6
CLDN3O15551 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN3O15551 NDUFA12P1-201ENST00000455914 406 ntBASIC5.05□□□□□ -1.6
CLDN3O15551 AL445433.1-201ENST00000457507 257 ntBASIC5.05□□□□□ -1.6
CLDN3O15551 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.05□□□□□ -1.6
CLDN3O15551 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN3O15551 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN3O15551 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN3O15551 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN3O15551 RN7SKP92-201ENST00000517266 244 ntBASIC5.05□□□□□ -1.6
CLDN3O15551 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
CLDN3O15551 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN3O15551 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CLDN3O15551 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN3O15551 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN3O15551 AP003499.2-201ENST00000624100 483 ntBASIC5.05□□□□□ -1.6
CLDN3O15551 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN3O15551 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN3O15551 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN3O15551 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN3O15551 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN3O15551 AC135352.1-201ENST00000506173 1418 ntBASIC5.05□□□□□ -1.6
CLDN3O15551 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
CLDN3O15551 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN3O15551 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN3O15551 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN3O15551 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLDN3O15551 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN3O15551 KARSP3-201ENST00000571212 1504 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN3O15551 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN3O15551 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
CLDN3O15551 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLDN3O15551 RNU1-83P-201ENST00000363426 164 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN3O15551 AL034403.1-201ENST00000399414 885 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 RPA2P2-201ENST00000419698 796 ntBASIC5.04□□□□□ -1.6
CLDN3O15551 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN3O15551 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN3O15551 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms