Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 KATNBL1P5-201ENST00000605015 517 ntBASIC4.97□□□□□ -1.61
CCDC188H7C350 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC188H7C350 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC188H7C350 AP001005.3-201ENST00000622049 129 ntBASIC4.97□□□□□ -1.61
CCDC188H7C350 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC188H7C350 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC188H7C350 SNORA17.5-201ENST00000630429 132 ntBASIC4.97□□□□□ -1.61
CCDC188H7C350 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC188H7C350 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC188H7C350 TLK1P1-201ENST00000456760 2440 ntBASIC4.97□□□□□ -1.61
CCDC188H7C350 MAPK10-349ENST00000641767 3661 ntBASIC4.97□□□□□ -1.61
CCDC188H7C350 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CCDC188H7C350 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC188H7C350 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC188H7C350 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC188H7C350 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CCDC188H7C350 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.96□□□□□ -1.61
CCDC188H7C350 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.96□□□□□ -1.61
CCDC188H7C350 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CCDC188H7C350 RNU6-452P-201ENST00000384406 107 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 AL031985.1-201ENST00000392713 418 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 NCSTNP1-201ENST00000406229 144 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC188H7C350 TATDN1P1-201ENST00000414123 891 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 LINC00993-201ENST00000420453 540 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 ARL2BPP3-201ENST00000421226 480 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 AL121882.1-201ENST00000422893 417 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 OR52B5P-201ENST00000435337 951 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.96□□□□□ -1.62
CCDC188H7C350 MTCYBP21-201ENST00000443300 1113 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC188H7C350 HMGB1P5-202ENST00000451497 985 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 RN7SL174P-201ENST00000475578 289 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.96□□□□□ -1.62
CCDC188H7C350 PPIAP19-201ENST00000486414 492 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 AC108693.1-201ENST00000496068 432 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 RNA5SP392-201ENST00000516905 112 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC188H7C350 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CCDC188H7C350 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.96□□□□□ -1.62
CCDC188H7C350 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC188H7C350 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC188H7C350 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC188H7C350 AC096553.1-201ENST00000605169 829 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 RPL21P136-201ENST00000605378 396 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC188H7C350 AC073592.7-201ENST00000623659 507 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 AC090617.9-201ENST00000623751 147 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 CR381572.2-201ENST00000624852 397 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 OR52B5P-202ENST00000641118 1110 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.96□□□□□ -1.62
CCDC188H7C350 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC188H7C350 ZFRP1-201ENST00000457579 2970 ntBASIC4.96□□□□□ -1.62
CCDC188H7C350 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC188H7C350 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC188H7C350 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC188H7C350 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC188H7C350 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC188H7C350 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC188H7C350 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC188H7C350 THAP12P4-201ENST00000528321 2266 ntBASIC4.95□□□□□ -1.62
CCDC188H7C350 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC188H7C350 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC188H7C350 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC188H7C350 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC188H7C350 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC188H7C350 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC188H7C350 MTND2P11-201ENST00000423638 648 ntBASIC4.95□□□□□ -1.62
CCDC188H7C350 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC188H7C350 PRPF38AP2-201ENST00000438179 851 ntBASIC4.95□□□□□ -1.62
CCDC188H7C350 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC188H7C350 AL137845.2-201ENST00000444292 988 ntBASIC4.95□□□□□ -1.62
CCDC188H7C350 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC188H7C350 RN7SL101P-201ENST00000496350 279 ntBASIC4.95□□□□□ -1.62
CCDC188H7C350 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC188H7C350 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC188H7C350 BX510359.5-201ENST00000515651 304 ntBASIC4.95□□□□□ -1.62
CCDC188H7C350 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC188H7C350 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC188H7C350 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC188H7C350 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC188H7C350 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC188H7C350 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC188H7C350 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC188H7C350 AC068714.1-201ENST00000559623 800 ntBASIC4.95□□□□□ -1.62
CCDC188H7C350 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC188H7C350 AC027455.1-201ENST00000574104 594 ntBASIC4.95□□□□□ -1.62
CCDC188H7C350 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC188H7C350 RN7SL176P-201ENST00000580352 264 ntBASIC4.95□□□□□ -1.62
CCDC188H7C350 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC188H7C350 AC004775.1-201ENST00000607389 753 ntBASIC4.95□□□□□ -1.62
CCDC188H7C350 AL627230.1-201ENST00000613077 211 ntBASIC4.95□□□□□ -1.62
CCDC188H7C350 AL591926.8-201ENST00000616876 211 ntBASIC4.95□□□□□ -1.62
CCDC188H7C350 uc_338.9-201ENST00000617424 182 ntBASIC4.95□□□□□ -1.62
CCDC188H7C350 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC188H7C350 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC188H7C350 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC188H7C350 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms