Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMX2-CTNND1H3BSU7 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 TLK1P1-201ENST00000456760 2440 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC139713.2-214ENST00000642059 1811 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC126755.2-208ENST00000327792 462 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC138969.1-213ENST00000331436 462 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 IGKV7-3-201ENST00000357453 298 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 RNU1-83P-201ENST00000363426 164 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 RNA5SP447-201ENST00000363749 119 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 UQCRBP1-201ENST00000421129 336 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC073143.1-201ENST00000436316 395 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 TDGF1P1-201ENST00000445734 527 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 ATP5J2P6-201ENST00000565203 266 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL020997.2-201ENST00000602607 184 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 OR7A19P-201ENST00000608051 733 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL445423.1-201ENST00000609941 536 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC011815.3-201ENST00000624194 473 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 MIR6830-201ENST00000636015 70 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC011503.2-201ENST00000594230 1500 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC009951.1-201ENST00000623674 2614 ntBASIC4.56□□□□□ -1.68
TMX2-CTNND1H3BSU7 LINC01355-201ENST00000566551 5444 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 CASC19-206ENST00000641028 1430 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 MFSD8-220ENST00000641243 1422 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC123912.3-201ENST00000600907 1367 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 MIR195-201ENST00000385194 87 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 SDHCP2-201ENST00000398565 501 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 QRSL1P2-201ENST00000418582 964 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC140479.3-201ENST00000418944 1126 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 EIF4HP2-201ENST00000424380 563 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 TMX2P1-201ENST00000436507 708 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 PPIAP21-201ENST00000464473 501 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC103987.1-201ENST00000473394 348 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 RN7SL817P-201ENST00000480777 288 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC013356.1-201ENST00000489027 564 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL358913.1-201ENST00000554342 121 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL049536.1-201ENST00000625043 744 ntBASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
TMX2-CTNND1H3BSU7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 MAPK10-320ENST00000641462 6696 ntBASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 VDAC2P1-201ENST00000399358 958 ntBASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 NDUFA5P1-201ENST00000433858 341 ntBASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 RPL7AP28-201ENST00000464513 571 ntBASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 STRADBP1-201ENST00000478954 1281 ntBASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC111000.5-201ENST00000506559 1178 ntBASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC138409.2-202ENST00000507274 458 ntBASIC4.54□□□□□ -1.68
TMX2-CTNND1H3BSU7 AC091868.1-201ENST00000508746 304 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms