Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 MTND3P13-201ENST00000574391 343 ntBASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 AL133481.2-203ENST00000607558 139 ntBASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 AC231759.1-201ENST00000616455 597 ntBASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 AC090527.3-201ENST00000619041 548 ntBASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 AL121895.2-201ENST00000619558 447 ntBASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 AL049536.1-201ENST00000625043 744 ntBASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 CYP4F35P-202ENST00000636121 390 ntBASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 LINC01739-205ENST00000641890 573 ntBASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 AC093775.1-201ENST00000624154 1868 ntBASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC187A0A096LP49 AC007996.1-201ENST00000620414 2821 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 MTND4P5-201ENST00000435821 1374 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 MAPK10-338ENST00000641647 3362 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AC109446.4-201ENST00000623235 2755 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 SNORA17.1-201ENST00000362945 126 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 RNU6-549P-201ENST00000384433 107 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 RNU6-636P-201ENST00000384598 107 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AC119751.3-201ENST00000399720 670 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AL109941.1-201ENST00000401925 229 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 HMGB1P49-201ENST00000418882 569 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AC007161.1-204ENST00000423039 460 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 MTND2P40-201ENST00000436718 841 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 HMGB3P6-201ENST00000444896 598 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AC022431.1-201ENST00000450941 438 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 HIGD1AP8-201ENST00000453927 274 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 RPL7P6-201ENST00000480903 738 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 ATP5LP5-201ENST00000483050 299 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AC091435.1-201ENST00000505442 584 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 RPS27AP18-201ENST00000515536 459 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 snoU109.5-201ENST00000516231 132 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 HIGD1AP5-201ENST00000529959 259 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AC023824.3-201ENST00000569003 562 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AC010487.1-201ENST00000594408 1172 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AC025588.2-201ENST00000604851 466 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 HIRAP1-201ENST00000605318 787 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AL138478.1-201ENST00000612252 832 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 STMN1P1-201ENST00000617809 440 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 OR55B1P-203ENST00000641518 2602 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 AL390862.1-201ENST00000635467 1469 ntBASIC5.2□□□□□ -1.58
CCDC187A0A096LP49 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 ENSAP3-201ENST00000312710 333 ntBASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 RNU6-543P-201ENST00000362576 108 ntBASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 SNORA16A-201ENST00000384342 137 ntBASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 AC136624.1-201ENST00000400791 413 ntBASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC187A0A096LP49 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms