Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 NANOGP2-201ENST00000435391 727 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 PPIAP17-201ENST00000438507 471 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AC019185.1-201ENST00000442718 389 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 EEF1A1P1-201ENST00000447052 739 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AC128716.1-201ENST00000475129 166 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 SIAH1P1-201ENST00000479411 923 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 RPL7L1P13-201ENST00000511702 739 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AC092747.2-201ENST00000545069 983 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AC090022.1-201ENST00000546569 311 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 NF1P5-201ENST00000588287 448 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AL157770.1-201ENST00000623049 439 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AP002782.1-201ENST00000623107 614 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AL451142.2-201ENST00000429076 2090 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 AC068870.1-201ENST00000563737 2455 ntBASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A3BPQ9Y5P4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 SMG1P6-201ENST00000532337 2930 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 RN7SKP162-201ENST00000363605 345 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 RNA5SP234-201ENST00000363916 119 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 MIR513B-201ENST00000385136 84 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AL356320.2-201ENST00000417263 507 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 MTCO2P21-201ENST00000419780 677 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC02210-201ENST00000444561 288 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 ZNF736P8Y-201ENST00000451913 669 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 RN7SL197P-201ENST00000466981 299 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC100832.1-201ENST00000471945 383 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 RN7SL547P-201ENST00000490793 290 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 HIGD1AP6-201ENST00000521833 279 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC110743.1-201ENST00000584870 478 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC012616.1-201ENST00000600294 197 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC007204.2-201ENST00000615022 616 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC025574.2-201ENST00000615621 514 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC005840.5-201ENST00000619166 599 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC013470.4-201ENST00000619978 986 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC132068.1-201ENST00000623805 459 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC140134.1-201ENST00000511830 3544 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC104964.3-201ENST00000606115 2860 ntBASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A3BPQ9Y5P4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 RARSP1-201ENST00000542842 1418 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 NACA3P-201ENST00000359690 648 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 RNA5SP319-201ENST00000362768 119 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 RNU6-707P-201ENST00000364647 95 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 RNU4-2-201ENST00000365668 141 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 SNORA40.2-201ENST00000390847 128 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 NPM1P4-201ENST00000414095 812 ntBASIC6.18□□□□□ -1.42
COL4A3BPQ9Y5P4 RPL22P18-201ENST00000417197 377 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms