Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
PCDHB11Q9Y5F2 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AL355488.2-201ENST00000609909 2850 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 RPL7P26-201ENST00000333817 754 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 RNA5SP114-201ENST00000363780 113 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 BTBD10P2-201ENST00000404779 676 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 RNU6-1148P-201ENST00000410992 104 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AL353777.1-201ENST00000425552 326 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AL627308.1-201ENST00000435693 821 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 RPS3AP38-201ENST00000435889 763 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 HMGB1P18-201ENST00000438801 619 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC009237.4-201ENST00000441078 238 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 BNIP3P2-201ENST00000441221 577 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 RPS23P9-201ENST00000448848 438 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 KF459542.1-201ENST00000450908 553 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 RPSAP7-201ENST00000456871 885 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 ST13P14-201ENST00000474095 734 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC044810.1-201ENST00000480271 711 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 RPL7P6-201ENST00000480903 738 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 SNRPCP11-201ENST00000492453 205 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 RN7SL306P-201ENST00000492941 296 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC146944.3-201ENST00000509969 371 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 RNA5SP518-201ENST00000515957 119 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC010287.1-201ENST00000566916 357 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 MIR3167-201ENST00000579623 85 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 RN7SL32P-201ENST00000580514 281 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC008737.2-201ENST00000599446 118 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 RPL26P30-202ENST00000602923 645 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC010591.1-201ENST00000603941 649 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC007255.2-201ENST00000604053 631 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 U1.34-201ENST00000618578 162 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AC097504.1-201ENST00000515103 2415 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 MTND4P35-201ENST00000604257 1375 ntBASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.95□□□□□ -1.3
PCDHB11Q9Y5F2 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHB11Q9Y5F2 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
PCDHB11Q9Y5F2 NBPF8-201ENST00000583271 5330 ntBASIC6.94□□□□□ -1.3
PCDHB11Q9Y5F2 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHB11Q9Y5F2 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.94□□□□□ -1.3
PCDHB11Q9Y5F2 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.94□□□□□ -1.3
PCDHB11Q9Y5F2 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.94□□□□□ -1.3
PCDHB11Q9Y5F2 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
PCDHB11Q9Y5F2 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PCDHB11Q9Y5F2 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.94□□□□□ -1.3
PCDHB11Q9Y5F2 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
PCDHB11Q9Y5F2 RN7SKP118-201ENST00000364331 330 ntBASIC6.94□□□□□ -1.3
PCDHB11Q9Y5F2 SNORA33.2-201ENST00000365413 134 ntBASIC6.94□□□□□ -1.3
PCDHB11Q9Y5F2 RNU6-730P-201ENST00000383954 104 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms