Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 HMGB1P46-201ENST00000520062 610 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 OR5M2P-201ENST00000529003 936 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AC010503.3-201ENST00000594355 540 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AC098935.2-201ENST00000604222 466 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AC018754.1-201ENST00000607486 925 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AL451049.1-201ENST00000608672 497 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AC005156.1-201ENST00000613371 573 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AC015914.2-201ENST00000618167 288 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AP003485.1-201ENST00000625093 753 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 MFSD8-216ENST00000641147 4009 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AL590240.1-201ENST00000334118 313 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AL590762.2-201ENST00000395798 571 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 CYB5AP4-201ENST00000396692 399 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 E2F6P2-201ENST00000420708 748 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 ARL2BPP3-201ENST00000421226 480 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 RPL7P57-201ENST00000423238 740 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 CKS1BP6-201ENST00000424932 240 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 MTCO1P51-201ENST00000427672 1060 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AC011242.1-201ENST00000433596 1158 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 RAB28P3-201ENST00000448325 597 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AC079168.2-201ENST00000453977 416 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 RNU2-30P-201ENST00000516209 141 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 RNU1-6P-201ENST00000516290 144 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AL110118.1-201ENST00000553543 400 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AC087477.6-201ENST00000559595 843 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AC233266.2-201ENST00000567067 528 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 MIR4270-201ENST00000581799 70 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AC073091.2-201ENST00000603205 907 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 OR4G3P-201ENST00000633500 913 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AL445984.1-201ENST00000637834 659 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AL034370.1-201ENST00000397254 1590 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 AC019072.1-201ENST00000604535 1551 ntBASIC5.11□□□□□ -1.59
SIX4Q9UIU6 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SIX4Q9UIU6 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 MIR122-201ENST00000385044 85 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AL356968.2-201ENST00000412769 1257 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 TTC39DP-201ENST00000416781 1688 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AC019050.1-201ENST00000418508 492 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AL034379.1-201ENST00000423216 253 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 HMGN2P27-201ENST00000427352 270 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AL606517.1-201ENST00000446914 387 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AC108463.1-201ENST00000450258 347 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 STRADBP1-201ENST00000478954 1281 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AC108729.1-201ENST00000487812 947 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 RN7SL205P-201ENST00000490174 284 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.1□□□□□ -1.59
SIX4Q9UIU6 RNA5SP249-201ENST00000516127 99 ntBASIC5.1□□□□□ -1.59
SIX4Q9UIU6 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms