Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 OR5M6P-201ENST00000530227 937 ntBASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 OR5F2P-201ENST00000532761 941 ntBASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 BNIP3P6-201ENST00000549284 499 ntBASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 AC006116.10-201ENST00000591836 581 ntBASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 AC008687.2-201ENST00000597865 520 ntBASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 AC097381.3-201ENST00000608962 462 ntBASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 MIR6778-201ENST00000617912 73 ntBASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 AC090617.10-201ENST00000624308 134 ntBASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 AL096816.1-201ENST00000623300 2920 ntBASIC7.45□□□□□ -1.22
LIMD1Q9UGP4 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AL031679.1-201ENST00000400616 525 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 MIR1282-201ENST00000408865 101 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AL807761.1-201ENST00000417622 171 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AL139184.1-202ENST00000422303 222 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 MTCYBP8-201ENST00000422855 651 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 RPL23AP74-201ENST00000437246 471 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 RPL36AP15-201ENST00000444514 266 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AC079781.2-201ENST00000446424 169 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AC118758.1-202ENST00000454719 225 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 RPS20P32-201ENST00000456044 356 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 RN7SL492P-201ENST00000460700 295 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 RN7SL568P-201ENST00000493069 298 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 RPS4XP18-201ENST00000495480 763 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AC090453.1-201ENST00000495560 436 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 GLYATL1P4-201ENST00000529326 906 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 MIR4742-201ENST00000581069 85 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 MIR4732-201ENST00000581873 76 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 SNORD39.3-201ENST00000584451 71 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 OR4G1P-203ENST00000641984 1631 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 FLJ42393-201ENST00000623801 2270 ntBASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
LIMD1Q9UGP4 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
LIMD1Q9UGP4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.43□□□□□ -1.22
LIMD1Q9UGP4 THUMPD3P1-201ENST00000506556 1480 ntBASIC7.43□□□□□ -1.22
LIMD1Q9UGP4 AC217777.1-201ENST00000570034 1471 ntBASIC7.43□□□□□ -1.22
LIMD1Q9UGP4 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
LIMD1Q9UGP4 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
LIMD1Q9UGP4 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.43□□□□□ -1.22
LIMD1Q9UGP4 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
LIMD1Q9UGP4 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
LIMD1Q9UGP4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms