Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 CUBNP3-201ENST00000457461 1784 ntBASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 AL606537.1-201ENST00000607258 2011 ntBASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 AL512353.3-201ENST00000417517 1326 ntBASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 OR5BR1P-201ENST00000524992 1330 ntBASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 AC090771.1-201ENST00000585803 1618 ntBASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CUEDC1Q9NWM3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 MFSD8-219ENST00000641228 2559 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 Y_RNA.395-201ENST00000383945 109 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 MIR16-1-201ENST00000385271 89 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 RN7SKP129-201ENST00000410288 299 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC083875.1-201ENST00000419509 405 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC062016.2-201ENST00000420950 676 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 ISCA1P6-201ENST00000427740 390 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 SKP1P3-201ENST00000429280 487 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC073900.1-201ENST00000429766 776 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 RPS24P8-201ENST00000431490 402 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 BMS1P19-201ENST00000433925 393 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 PPIAP17-201ENST00000438507 471 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 MTND2P29-201ENST00000438595 412 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 U8.20-201ENST00000459445 131 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 RN7SL283P-201ENST00000489055 303 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 RPL17P2-201ENST00000491913 451 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 RN7SL775P-201ENST00000498361 336 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC146944.3-201ENST00000509969 371 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC027801.3-201ENST00000515049 698 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 RNU6-835P-201ENST00000516974 104 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 RN7SKP40-201ENST00000517211 242 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AP005902.2-201ENST00000518393 307 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 OR5B19P-201ENST00000531766 928 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 VN1R84P-201ENST00000593697 235 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC009955.2-201ENST00000597288 542 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC005070.2-201ENST00000604391 260 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AL355333.1-201ENST00000605632 279 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AC040168.1-201ENST00000623594 991 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 AL355480.1-201ENST00000629041 99 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 SMG1P7-201ENST00000565246 2704 ntBASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CUEDC1Q9NWM3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 RNF6P1-201ENST00000444889 1784 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 CCDC150P1-201ENST00000537123 2215 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 AC005614.1-201ENST00000598952 3653 ntBASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.92□□□□□ -1.3
CUEDC1Q9NWM3 KARSP2-201ENST00000415696 1639 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms